Analysis of interatomic Contacts of Structural Units in PDB entry:
9D3I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9D3I entry

There are 10 chains in PDB entry 9D3I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 11	ASP 252
B	ARG 4	LEU 250
C	PHE 13	THR 245
D	HIS 16	ASP 247
G	VAL 14	ASN 248
P	ASP 49	LEU 146
H	SER 2	TYR 189
I	ALA 2	VAL 247
J	SER 5	LEU 200
K	MET 1	ASP 194

There are 62 helices in PDB entry 9D3I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	15	Right-handed alpha
Helix 2	2	A	25	34	Right-handed alpha
Helix 3	3	A	35	37	Right-handed alpha
Helix 4	4	A	86	109	Right-handed alpha
Helix 5	5	A	113	129	Right-handed alpha
Helix 6	6	A	174	190	Right-handed alpha
Helix 7	7	A	198	215	Right-handed alpha
Helix 8	8	A	237	252	Right-handed alpha
Helix 9	9	B	19	30	Right-handed alpha
Helix 10	10	B	57	61	Right-handed alpha
Helix 11	11	B	78	96	Right-handed alpha
Helix 12	12	B	97	102	Right-handed alpha
Helix 13	13	B	106	124	Right-handed alpha
Helix 14	14	B	167	179	Right-handed alpha
Helix 15	15	B	184	199	Right-handed alpha
Helix 16	16	B	219	222	Right-handed alpha
Helix 17	17	B	239	249	Right-handed alpha
Helix 18	18	C	19	30	Right-handed alpha
Helix 19	19	C	80	103	Right-handed alpha
Helix 20	20	C	107	125	Right-handed alpha
Helix 21	21	C	168	180	Right-handed alpha
Helix 22	22	C	185	200	Right-handed alpha
Helix 23	23	C	231	242	Right-handed alpha
Helix 24	24	D	19	28	Right-handed alpha
Helix 25	25	D	56	60	Right-handed alpha
Helix 26	26	D	78	101	Right-handed alpha
Helix 27	27	D	105	120	Right-handed alpha
Helix 28	28	D	167	179	Right-handed alpha
Helix 29	29	D	187	201	Right-handed alpha
Helix 30	30	D	206	210	Right-handed alpha
Helix 31	31	D	225	246	Right-handed alpha
Helix 32	32	G	21	33	Right-handed alpha
Helix 33	33	G	81	104	Right-handed alpha
Helix 34	34	G	108	122	Right-handed alpha
Helix 35	35	G	123	125	Right-handed alpha
Helix 36	36	G	168	183	Right-handed alpha
Helix 37	37	G	188	204	Right-handed alpha
Helix 38	38	G	205	208	Right-handed alpha
Helix 39	39	G	233	248	Right-handed alpha
Helix 40	40	P	52	58	Right-handed alpha
Helix 41	41	P	60	76	Right-handed alpha
Helix 42	42	P	79	95	Right-handed alpha
Helix 43	43	P	104	111	Right-handed alpha
Helix 44	44	P	118	123	Right-handed alpha
Helix 45	45	P	140	146	Right-handed alpha
Helix 46	46	H	50	71	Right-handed alpha
Helix 47	47	H	74	89	Right-handed alpha
Helix 48	48	H	136	142	Right-handed alpha
Helix 49	49	H	147	160	Right-handed alpha
Helix 50	50	I	9	18	Right-handed alpha
Helix 51	51	I	77	100	Right-handed alpha
Helix 52	52	I	104	119	Right-handed alpha
Helix 53	53	I	159	171	Right-handed alpha
Helix 54	54	I	176	192	Right-handed alpha
Helix 55	55	J	56	79	Right-handed alpha
Helix 56	56	J	83	97	Right-handed alpha
Helix 57	57	J	142	154	Right-handed alpha
Helix 58	58	J	159	175	Right-handed alpha
Helix 59	59	K	51	72	Right-handed alpha
Helix 60	60	K	76	91	Right-handed alpha
Helix 61	61	K	136	148	Right-handed alpha
Helix 62	62	K	153	172	Right-handed alpha

There are 92 sheets in PDB entry 9D3I. Click on sheet of interest to get list of strands forming it: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92,

There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	46	first strand

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There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	56	first strand

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There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	74	first strand

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There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	84	first strand

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There are 1 strands in 5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	147	first strand

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There are 1 strands in 6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	157	first strand

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There are 1 strands in 7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	166	first strand

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There are 1 strands in 8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	171	first strand

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There are 1 strands in 9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	229	first strand

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There are 1 strands in 10 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	236	first strand

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There are 1 strands in 11 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	38	first strand

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There are 1 strands in 12 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	48	first strand

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There are 1 strands in 13 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	68	first strand

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There are 1 strands in 14 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	77	first strand

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There are 1 strands in 15 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	140	first strand

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There are 1 strands in 16 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	150	first strand

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There are 1 strands in 17 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	158	first strand

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There are 1 strands in 18 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	164	first strand

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There are 1 strands in 19 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	214	first strand

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There are 1 strands in 20 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand

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There are 1 strands in 21 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	237	first strand

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There are 1 strands in 22 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	39	first strand

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There are 1 strands in 23 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	49	first strand

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There are 1 strands in 24 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	70	first strand

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There are 1 strands in 25 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	79	first strand

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There are 1 strands in 26 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	139	first strand

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There are 1 strands in 27 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	151	first strand

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There are 1 strands in 28 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	160	first strand

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There are 1 strands in 29 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	166	first strand

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There are 1 strands in 30 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	217	first strand

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There are 1 strands in 31 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	226	229	first strand

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There are 1 strands in 32 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	37	first strand

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There are 1 strands in 33 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	47	first strand

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There are 1 strands in 34 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	68	first strand

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There are 1 strands in 35 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	77	first strand

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There are 1 strands in 36 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	138	first strand

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There are 1 strands in 37 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	151	first strand

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There are 1 strands in 38 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	158	first strand

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There are 1 strands in 39 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	164	first strand

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There are 1 strands in 40 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	212	216	first strand

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There are 1 strands in 41 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	220	223	first strand

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There are 1 strands in 42 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	37	42	first strand

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There are 1 strands in 43 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	54	first strand

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There are 1 strands in 44 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	67	70	first strand

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There are 1 strands in 45 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	74	80	first strand

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There are 1 strands in 46 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	134	142	first strand

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There are 1 strands in 47 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	145	151	first strand

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There are 1 strands in 48 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	157	159	first strand

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There are 1 strands in 49 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	162	165	first strand

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There are 1 strands in 50 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	211	220	first strand

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There are 1 strands in 51 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	228	231	first strand

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There are 1 strands in 52 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand

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There are 1 strands in 53 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand

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There are 1 strands in 54 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	38	first strand

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There are 1 strands in 55 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	41	45	first strand

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There are 1 strands in 56 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	103	first strand

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There are 1 strands in 57 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	107	113	first strand

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There are 1 strands in 58 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	120	122	first strand

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There are 1 strands in 59 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	124	126	first strand

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There are 1 strands in 60 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	175	179	first strand

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There are 1 strands in 61 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	182	186	first strand

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There are 1 strands in 62 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	32	37	first strand

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There are 1 strands in 63 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	40	46	first strand

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There are 1 strands in 64 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	63	67	first strand

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There are 1 strands in 65 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	70	76	first strand

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There are 1 strands in 66 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	125	133	first strand

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There are 1 strands in 67 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	142	first strand

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There are 1 strands in 68 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	148	150	first strand

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There are 1 strands in 69 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	153	156	first strand

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There are 1 strands in 70 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	202	208	first strand

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There are 1 strands in 71 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	213	216	first strand

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There are 1 strands in 72 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	243	246	first strand

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There are 1 strands in 73 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	17	first strand

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There are 1 strands in 74 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	20	26	first strand

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There are 1 strands in 75 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	43	46	first strand

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There are 1 strands in 76 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	49	52	first strand

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There are 1 strands in 77 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	108	112	first strand

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There are 1 strands in 78 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	119	124	first strand

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There are 1 strands in 79 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	130	132	first strand

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There are 1 strands in 80 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	136	140	first strand

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There are 1 strands in 81 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	185	191	first strand

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There are 1 strands in 82 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	195	200	first strand

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There are 1 strands in 83 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	8	first strand

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There are 1 strands in 84 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	13	17	first strand

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There are 1 strands in 85 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	35	39	first strand

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There are 1 strands in 86 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	48	first strand

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There are 1 strands in 87 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	100	108	first strand

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There are 1 strands in 88 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	113	119	first strand

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There are 1 strands in 89 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	125	127	first strand

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There are 1 strands in 90 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	130	133	first strand

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There are 1 strands in 91 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	181	184	first strand

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There are 1 strands in 92 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	188	191	first strand

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9D3I

Analysis of interatomic Contacts of Structural Units in PDB entry:
9D3I