Analysis of interatomic Contacts of Structural Units in PDB entry:
9D66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9D66 entry

There are 3 chains in PDB entry 9D66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 17LEU 470
B
 ASN 17LEU 470
C
 ASN 17LEU 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 9D66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 42Right-handed alpha
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
53 81Right-handed alpha
Helix 4
AA4
A
84 117Right-handed alpha
Helix 5
AA5
A
138 150Right-handed alpha
Helix 6
AA6
A
153 158Right-handed alpha
Helix 7
AA7
A
211 229Right-handed alpha
Helix 8
AA8
A
230 232Right-handed 310
Helix 9
AA9
A
233 272Right-handed alpha
Helix 10
AB1
A
276 282Right-handed alpha
Helix 11
AB2
A
282 299Right-handed alpha
Helix 12
AB3
A
299 309Right-handed alpha
Helix 13
AB4
A
312 320Right-handed alpha
Helix 14
AB5
A
320 331Right-handed alpha
Helix 15
AB6
A
336 347Right-handed alpha
Helix 16
AB7
A
351 366Right-handed alpha
Helix 17
AB8
A
367 385Right-handed alpha
Helix 18
AB9
A
390 408Right-handed alpha
Helix 19
AC1
A
414 426Right-handed alpha
Helix 20
AC2
A
429 438Right-handed 310
Helix 21
AC3
A
439 467Right-handed alpha
Helix 22
AC4
B
18 42Right-handed alpha
Helix 23
AC5
B
45 53Right-handed alpha
Helix 24
AC6
B
53 81Right-handed alpha
Helix 25
AC7
B
84 117Right-handed alpha
Helix 26
AC8
B
138 150Right-handed alpha
Helix 27
AC9
B
153 158Right-handed alpha
Helix 28
AD1
B
211 229Right-handed alpha
Helix 29
AD2
B
230 232Right-handed 310
Helix 30
AD3
B
233 272Right-handed alpha
Helix 31
AD4
B
276 282Right-handed alpha
Helix 32
AD5
B
282 299Right-handed alpha
Helix 33
AD6
B
299 309Right-handed alpha
Helix 34
AD7
B
312 320Right-handed alpha
Helix 35
AD8
B
320 331Right-handed alpha
Helix 36
AD9
B
336 347Right-handed alpha
Helix 37
AE1
B
351 366Right-handed alpha
Helix 38
AE2
B
367 385Right-handed alpha
Helix 39
AE3
B
390 408Right-handed alpha
Helix 40
AE4
B
414 426Right-handed alpha
Helix 41
AE5
B
429 438Right-handed 310
Helix 42
AE6
B
439 467Right-handed alpha
Helix 43
AE7
C
18 42Right-handed alpha
Helix 44
AE8
C
45 53Right-handed alpha
Helix 45
AE9
C
53 81Right-handed alpha
Helix 46
AF1
C
84 117Right-handed alpha
Helix 47
AF2
C
138 150Right-handed alpha
Helix 48
AF3
C
153 158Right-handed alpha
Helix 49
AF4
C
211 229Right-handed alpha
Helix 50
AF5
C
230 232Right-handed 310
Helix 51
AF6
C
233 272Right-handed alpha
Helix 52
AF7
C
276 282Right-handed alpha
Helix 53
AF8
C
282 299Right-handed alpha
Helix 54
AF9
C
299 309Right-handed alpha
Helix 55
AG1
C
312 320Right-handed alpha
Helix 56
AG2
C
320 331Right-handed alpha
Helix 57
AG3
C
336 347Right-handed alpha
Helix 58
AG4
C
351 366Right-handed alpha
Helix 59
AG5
C
367 385Right-handed alpha
Helix 60
AG6
C
390 408Right-handed alpha
Helix 61
AG7
C
414 426Right-handed alpha
Helix 62
AG8
C
429 438Right-handed 310
Helix 63
AG9
C
439 467Right-handed alpha
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There are 3 sheets in PDB entry 9D66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 167first strand
Strand 2
A
201 208anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 167first strand
Strand 2
B
201 208anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 167first strand
Strand 2
C
201 208anti-parallel
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