Analysis of interatomic Contacts of Structural Units in PDB entry:
9D68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9D68 entry

There is 1 chain in PDB entry 9D68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 19MET 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9D68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 42Right-handed alpha
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
53 65Right-handed alpha
Helix 4
AA4
A
66 82Right-handed alpha
Helix 5
AA5
A
83 117Right-handed alpha
Helix 6
AA6
A
137 150Right-handed alpha
Helix 7
AA7
A
153 158Right-handed alpha
Helix 8
AA8
A
211 230Right-handed alpha
Helix 9
AA9
A
233 273Right-handed alpha
Helix 10
AB1
A
276 282Right-handed alpha
Helix 11
AB2
A
282 299Right-handed alpha
Helix 12
AB3
A
299 309Right-handed alpha
Helix 13
AB4
A
312 320Right-handed alpha
Helix 14
AB5
A
320 331Right-handed alpha
Helix 15
AB6
A
336 347Right-handed alpha
Helix 16
AB7
A
351 366Right-handed alpha
Helix 17
AB8
A
367 385Right-handed alpha
Helix 18
AB9
A
390 403Right-handed alpha
Helix 19
AC1
A
413 427Right-handed alpha
Helix 20
AC2
A
429 435Right-handed 310
Helix 21
AC3
A
436 466Right-handed alpha
Helix 22
AC4
A
466 473Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9D68.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 167first strand
Strand 2
A
201 208anti-parallel
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