Analysis of interatomic Contacts of Structural Units in PDB entry:
9DBD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DBD entry

There is 1 chain in PDB entry 9DBD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1SER 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9DBD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 19Right-handed alpha
Helix 2
AA2
A
22 40Right-handed alpha
Helix 3
AA3
A
45 49Right-handed 310
Helix 4
AA4
A
55 81Right-handed alpha
Helix 5
AA5
A
83 105Right-handed alpha
Helix 6
AA6
A
134 151Right-handed alpha
Helix 7
AA7
A
154 172Right-handed alpha
Helix 8
AA8
A
187 213Right-handed alpha
Helix 9
AA9
A
215 237Right-handed alpha
Helix 10
AB1
A
266 283Right-handed alpha
Helix 11
AB2
A
286 304Right-handed alpha
Helix 12
AB3
A
319 345Right-handed alpha
Helix 13
AB4
A
347 369Right-handed alpha
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There are no sheets in PDB entry 9DBD
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