Analysis of interatomic Contacts of Structural Units in PDB entry:
9DC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DC0 entry

There is 1 chain in PDB entry 9DC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLN 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9DC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 26Right-handed alpha
Helix 2
AA2
A
38 43Right-handed alpha
Helix 3
AA3
A
48 69Right-handed alpha
Helix 4
AA4
A
79 91Right-handed alpha
Helix 5
AA5
A
103 120Right-handed alpha
Helix 6
AA6
A
134 142Right-handed alpha
Helix 7
AA7
A
149 158Right-handed alpha
Helix 8
AA8
A
171 177Right-handed alpha
Helix 9
AA9
A
185 190Right-handed alpha
Helix 10
AB1
A
195 199Right-handed 310
Helix 11
AB2
A
213 233Right-handed alpha
Helix 12
AB3
A
251 257Right-handed alpha
Helix 13
AB4
A
261 277Right-handed alpha
Helix 14
AB5
A
283 286Right-handed 310
Helix 15
AB6
A
287 301Right-handed alpha
Helix 16
AB7
A
323 332Right-handed alpha
Helix 17
AB8
A
337 351Right-handed alpha
Helix 18
AB9
A
354 366Right-handed alpha
Helix 19
AC1
A
373 385Right-handed alpha
Helix 20
AC2
A
389 401Right-handed alpha
Helix 21
AC3
A
416 423Right-handed alpha
Helix 22
AC4
A
426 433Right-handed alpha
Helix 23
AC5
A
434 437Right-handed 310
Helix 24
AC6
A
446 450Right-handed 310
Helix 25
AC7
A
451 458Right-handed alpha
Helix 26
AC8
A
472 488Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9DC0.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 77first strand
Strand 2
A
30 37parallel
Strand 3
A
4 9parallel
Strand 4
A
93 99parallel
Strand 5
A
123 127parallel
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