Analysis of interatomic Contacts of Structural Units in PDB entry:
9DIJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DIJ entry

There are 5 chains in PDB entry 9DIJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 118PRO 755
B
 ARG 118PRO 755
C
 ARG 118PRO 755
D
 ARG 118PRO 755
E
 ARG 118PRO 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are130 helices in PDB entry 9DIJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
119 129Right-handed alpha
Helix 2
AA2
A
133 146Right-handed alpha
Helix 3
AA3
A
153 163Right-handed alpha
Helix 4
AA4
A
169 178Right-handed alpha
Helix 5
AA5
A
182 197Right-handed alpha
Helix 6
AA6
A
217 225Right-handed alpha
Helix 7
AA7
A
227 238Right-handed alpha
Helix 8
AA8
A
264 272Right-handed alpha
Helix 9
AA9
A
276 283Right-handed alpha
Helix 10
AB1
A
298 307Right-handed alpha
Helix 11
AB2
A
315 329Right-handed alpha
Helix 12
AB3
A
330 334Right-handed 310
Helix 13
AB4
A
343 351Right-handed alpha
Helix 14
AB5
A
354 362Right-handed alpha
Helix 15
AB6
A
402 409Right-handed alpha
Helix 16
AB7
A
415 420Right-handed alpha
Helix 17
AB8
A
422 436Right-handed alpha
Helix 18
AB9
A
437 461Right-handed alpha
Helix 19
AC1
A
490 509Right-handed alpha
Helix 20
AC2
A
519 539Right-handed alpha
Helix 21
AC3
A
546 565Right-handed alpha
Helix 22
AC4
A
572 586Right-handed alpha
Helix 23
AC5
A
586 609Right-handed alpha
Helix 24
AC6
A
625 636Right-handed alpha
Helix 25
AC7
A
650 685Right-handed alpha
Helix 26
AC8
A
687 707Right-handed alpha
Helix 27
AC9
B
119 129Right-handed alpha
Helix 28
AD1
B
133 146Right-handed alpha
Helix 29
AD2
B
153 163Right-handed alpha
Helix 30
AD3
B
169 178Right-handed alpha
Helix 31
AD4
B
182 197Right-handed alpha
Helix 32
AD5
B
217 225Right-handed alpha
Helix 33
AD6
B
227 238Right-handed alpha
Helix 34
AD7
B
264 272Right-handed alpha
Helix 35
AD8
B
276 283Right-handed alpha
Helix 36
AD9
B
298 307Right-handed alpha
Helix 37
AE1
B
315 329Right-handed alpha
Helix 38
AE2
B
330 334Right-handed 310
Helix 39
AE3
B
343 351Right-handed alpha
Helix 40
AE4
B
354 362Right-handed alpha
Helix 41
AE5
B
402 409Right-handed alpha
Helix 42
AE6
B
415 420Right-handed alpha
Helix 43
AE7
B
422 436Right-handed alpha
Helix 44
AE8
B
437 461Right-handed alpha
Helix 45
AE9
B
490 509Right-handed alpha
Helix 46
AF1
B
519 539Right-handed alpha
Helix 47
AF2
B
546 565Right-handed alpha
Helix 48
AF3
B
572 586Right-handed alpha
Helix 49
AF4
B
586 609Right-handed alpha
Helix 50
AF5
B
625 636Right-handed alpha
Helix 51
AF6
B
650 685Right-handed alpha
Helix 52
AF7
B
687 707Right-handed alpha
Helix 53
AF8
C
119 129Right-handed alpha
Helix 54
AF9
C
133 146Right-handed alpha
Helix 55
AG1
C
153 163Right-handed alpha
Helix 56
AG2
C
169 178Right-handed alpha
Helix 57
AG3
C
182 197Right-handed alpha
Helix 58
AG4
C
217 225Right-handed alpha
Helix 59
AG5
C
227 238Right-handed alpha
Helix 60
AG6
C
264 272Right-handed alpha
Helix 61
AG7
C
276 283Right-handed alpha
Helix 62
AG8
C
298 307Right-handed alpha
Helix 63
AG9
C
315 329Right-handed alpha
Helix 64
AH1
C
330 334Right-handed 310
Helix 65
AH2
C
343 351Right-handed alpha
Helix 66
AH3
C
354 362Right-handed alpha
Helix 67
AH4
C
402 409Right-handed alpha
Helix 68
AH5
C
415 420Right-handed alpha
Helix 69
AH6
C
422 436Right-handed alpha
Helix 70
AH7
C
437 461Right-handed alpha
Helix 71
AH8
C
490 509Right-handed alpha
Helix 72
AH9
C
519 539Right-handed alpha
Helix 73
AI1
C
546 565Right-handed alpha
Helix 74
AI2
C
572 586Right-handed alpha
Helix 75
AI3
C
586 609Right-handed alpha
Helix 76
AI4
C
625 636Right-handed alpha
Helix 77
AI5
C
650 685Right-handed alpha
Helix 78
AI6
C
687 707Right-handed alpha
Helix 79
AI7
D
119 129Right-handed alpha
Helix 80
AI8
D
133 146Right-handed alpha
Helix 81
AI9
D
153 163Right-handed alpha
Helix 82
AJ1
D
169 178Right-handed alpha
Helix 83
AJ2
D
182 197Right-handed alpha
Helix 84
AJ3
D
217 225Right-handed alpha
Helix 85
AJ4
D
227 238Right-handed alpha
Helix 86
AJ5
D
264 272Right-handed alpha
Helix 87
AJ6
D
276 283Right-handed alpha
Helix 88
AJ7
D
298 307Right-handed alpha
Helix 89
AJ8
D
315 329Right-handed alpha
Helix 90
AJ9
D
330 334Right-handed 310
Helix 91
AK1
D
343 351Right-handed alpha
Helix 92
AK2
D
354 362Right-handed alpha
Helix 93
AK3
D
402 409Right-handed alpha
Helix 94
AK4
D
415 420Right-handed alpha
Helix 95
AK5
D
422 436Right-handed alpha
Helix 96
AK6
D
437 461Right-handed alpha
Helix 97
AK7
D
490 509Right-handed alpha
Helix 98
AK8
D
519 539Right-handed alpha
Helix 99
AK9
D
546 565Right-handed alpha
Helix 100
AL1
D
572 586Right-handed alpha
Helix 101
AL2
D
586 609Right-handed alpha
Helix 102
AL3
D
625 636Right-handed alpha
Helix 103
AL4
D
650 685Right-handed alpha
Helix 104
AL5
D
687 707Right-handed alpha
Helix 105
AL6
E
119 129Right-handed alpha
Helix 106
AL7
E
133 146Right-handed alpha
Helix 107
AL8
E
153 163Right-handed alpha
Helix 108
AL9
E
169 178Right-handed alpha
Helix 109
AM1
E
182 197Right-handed alpha
Helix 110
AM2
E
217 225Right-handed alpha
Helix 111
AM3
E
227 238Right-handed alpha
Helix 112
AM4
E
264 272Right-handed alpha
Helix 113
AM5
E
276 283Right-handed alpha
Helix 114
AM6
E
298 307Right-handed alpha
Helix 115
AM7
E
315 329Right-handed alpha
Helix 116
AM8
E
330 334Right-handed 310
Helix 117
AM9
E
343 351Right-handed alpha
Helix 118
AN1
E
354 362Right-handed alpha
Helix 119
AN2
E
402 409Right-handed alpha
Helix 120
AN3
E
415 420Right-handed alpha
Helix 121
AN4
E
422 436Right-handed alpha
Helix 122
AN5
E
437 461Right-handed alpha
Helix 123
AN6
E
490 509Right-handed alpha
Helix 124
AN7
E
519 539Right-handed alpha
Helix 125
AN8
E
546 565Right-handed alpha
Helix 126
AN9
E
572 586Right-handed alpha
Helix 127
AO1
E
586 609Right-handed alpha
Helix 128
AO2
E
625 636Right-handed alpha
Helix 129
AO3
E
650 685Right-handed alpha
Helix 130
AO4
E
687 707Right-handed alpha
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There are 5 sheets in PDB entry 9DIJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 381first strand
Strand 2
A
386 390anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
376 381first strand
Strand 2
B
386 390anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
376 381first strand
Strand 2
C
386 390anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
376 381first strand
Strand 2
D
386 390anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
376 381first strand
Strand 2
E
386 390anti-parallel
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