Analysis of interatomic Contacts of Structural Units in PDB entry:
9DIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DIL entry

There are 3 chains in PDB entry 9DIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 200SER 775
B
 GLU 200PHE 768
C
 VAL 556VAL 666
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 9DIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
202 206Right-handed 310
Helix 2
AA2
A
210 226Right-handed alpha
Helix 3
AA3
A
226 233Right-handed alpha
Helix 4
AA4
A
250 263Right-handed alpha
Helix 5
AA5
A
270 276Right-handed alpha
Helix 6
AA6
A
280 296Right-handed alpha
Helix 7
AA7
A
305 310Right-handed alpha
Helix 8
AA8
A
312 316Right-handed 310
Helix 9
AA9
A
319 334Right-handed alpha
Helix 10
AB1
A
349 353Right-handed 310
Helix 11
AB2
A
354 358Right-handed 310
Helix 12
AB3
A
373 385Right-handed alpha
Helix 13
AB4
A
395 403Right-handed alpha
Helix 14
AB5
A
407 431Right-handed alpha
Helix 15
AB6
A
438 443Right-handed alpha
Helix 16
AB7
A
448 458Right-handed alpha
Helix 17
AB8
A
475 479Right-handed 310
Helix 18
AB9
A
482 494Right-handed alpha
Helix 19
AC1
A
494 499Right-handed alpha
Helix 20
AC2
A
499 506Right-handed alpha
Helix 21
AC3
A
523 535Right-handed alpha
Helix 22
AC4
A
543 553Right-handed alpha
Helix 23
AC5
A
557 569Right-handed alpha
Helix 24
AC6
A
579 586Right-handed alpha
Helix 25
AC7
A
600 610Right-handed alpha
Helix 26
AC8
A
625 629Right-handed 310
Helix 27
AC9
A
649 661Right-handed alpha
Helix 28
AD1
A
671 679Right-handed alpha
Helix 29
AD2
A
683 713Right-handed alpha
Helix 30
AD3
A
732 740Right-handed alpha
Helix 31
AD4
A
741 743Right-handed 310
Helix 32
AD5
A
751 765Right-handed alpha
Helix 33
AD6
B
202 206Right-handed 310
Helix 34
AD7
B
210 226Right-handed alpha
Helix 35
AD8
B
226 233Right-handed alpha
Helix 36
AD9
B
251 263Right-handed alpha
Helix 37
AE1
B
270 276Right-handed alpha
Helix 38
AE2
B
280 296Right-handed alpha
Helix 39
AE3
B
305 310Right-handed alpha
Helix 40
AE4
B
318 334Right-handed alpha
Helix 41
AE5
B
335 338Right-handed 310
Helix 42
AE6
B
349 353Right-handed 310
Helix 43
AE7
B
354 359Right-handed 310
Helix 44
AE8
B
373 385Right-handed alpha
Helix 45
AE9
B
395 403Right-handed alpha
Helix 46
AF1
B
407 431Right-handed alpha
Helix 47
AF2
B
438 444Right-handed alpha
Helix 48
AF3
B
448 458Right-handed alpha
Helix 49
AF4
B
475 479Right-handed 310
Helix 50
AF5
B
482 494Right-handed alpha
Helix 51
AF6
B
494 499Right-handed alpha
Helix 52
AF7
B
499 507Right-handed alpha
Helix 53
AF8
B
523 535Right-handed alpha
Helix 54
AF9
B
543 553Right-handed alpha
Helix 55
AG1
B
557 569Right-handed alpha
Helix 56
AG2
B
580 586Right-handed alpha
Helix 57
AG3
B
598 610Right-handed alpha
Helix 58
AG4
B
625 629Right-handed 310
Helix 59
AG5
B
649 662Right-handed alpha
Helix 60
AG6
B
671 680Right-handed alpha
Helix 61
AG7
B
683 710Right-handed alpha
Helix 62
AG8
B
711 715Right-handed 310
Helix 63
AG9
B
732 740Right-handed alpha
Helix 64
AH1
B
741 743Right-handed 310
Helix 65
AH2
B
748 765Right-handed alpha
Helix 66
AH3
C
621 634Right-handed alpha
Helix 67
AH4
C
640 655Right-handed alpha
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There are 6 sheets in PDB entry 9DIL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 269first strand
Strand 2
A
299 303parallel
Strand 3
A
341 346parallel
Strand 4
A
240 243parallel
Strand 5
A
365 367parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 542first strand
Strand 2
A
572 576parallel
Strand 3
A
617 623parallel
Strand 4
A
513 517parallel
Strand 5
A
641 644parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 269first strand
Strand 2
B
299 303parallel
Strand 3
B
341 346parallel
Strand 4
B
240 243parallel
Strand 5
B
365 367parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
538 542first strand
Strand 2
B
572 577parallel
Strand 3
B
617 623parallel
Strand 4
B
513 517parallel
Strand 5
B
641 644parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
562 566first strand
Strand 2
C
576 580anti-parallel
Strand 3
C
583 585anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
590 596first strand
Strand 2
C
603 609anti-parallel
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