Analysis of interatomic Contacts of Structural Units in PDB entry:
9DLG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DLG entry

There are 5 chains in PDB entry 9DLG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 77ARG 231
A
 VAL 77ARG 231
C
 VAL 77ARG 231
D
 VAL 77ARG 231
E
 VAL 77ARG 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 9DLG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
86 88Right-handed 310
Helix 2
AA2
B
89 105Right-handed alpha
Helix 3
AA3
B
113 115Right-handed 310
Helix 4
AA4
B
120 131Right-handed alpha
Helix 5
AA5
B
142 145Right-handed 310
Helix 6
AA6
B
146 163Right-handed alpha
Helix 7
AA7
B
164 167Right-handed 310
Helix 8
AA8
B
186 191Right-handed alpha
Helix 9
AA9
B
200 210Right-handed alpha
Helix 10
AB1
B
211 228Right-handed alpha
Helix 11
AB2
B
229 231Right-handed 310
Helix 12
AB3
A
86 88Right-handed 310
Helix 13
AB4
A
89 105Right-handed alpha
Helix 14
AB5
A
113 115Right-handed 310
Helix 15
AB6
A
120 131Right-handed alpha
Helix 16
AB7
A
142 145Right-handed 310
Helix 17
AB8
A
146 163Right-handed alpha
Helix 18
AB9
A
164 167Right-handed 310
Helix 19
AC1
A
186 191Right-handed alpha
Helix 20
AC2
A
200 210Right-handed alpha
Helix 21
AC3
A
211 228Right-handed alpha
Helix 22
AC4
A
229 231Right-handed 310
Helix 23
AC5
C
86 88Right-handed 310
Helix 24
AC6
C
89 105Right-handed alpha
Helix 25
AC7
C
113 115Right-handed 310
Helix 26
AC8
C
120 131Right-handed alpha
Helix 27
AC9
C
142 145Right-handed 310
Helix 28
AD1
C
146 163Right-handed alpha
Helix 29
AD2
C
164 167Right-handed 310
Helix 30
AD3
C
186 191Right-handed alpha
Helix 31
AD4
C
200 210Right-handed alpha
Helix 32
AD5
C
211 228Right-handed alpha
Helix 33
AD6
C
229 231Right-handed 310
Helix 34
AD7
D
86 88Right-handed 310
Helix 35
AD8
D
89 105Right-handed alpha
Helix 36
AD9
D
113 115Right-handed 310
Helix 37
AE1
D
120 131Right-handed alpha
Helix 38
AE2
D
142 145Right-handed 310
Helix 39
AE3
D
146 163Right-handed alpha
Helix 40
AE4
D
164 167Right-handed 310
Helix 41
AE5
D
186 191Right-handed alpha
Helix 42
AE6
D
200 210Right-handed alpha
Helix 43
AE7
D
211 228Right-handed alpha
Helix 44
AE8
D
229 231Right-handed 310
Helix 45
AE9
E
86 88Right-handed 310
Helix 46
AF1
E
89 105Right-handed alpha
Helix 47
AF2
E
113 115Right-handed 310
Helix 48
AF3
E
120 131Right-handed alpha
Helix 49
AF4
E
142 145Right-handed 310
Helix 50
AF5
E
146 163Right-handed alpha
Helix 51
AF6
E
164 167Right-handed 310
Helix 52
AF7
E
186 191Right-handed alpha
Helix 53
AF8
E
200 210Right-handed alpha
Helix 54
AF9
E
211 228Right-handed alpha
Helix 55
AG1
E
229 231Right-handed 310
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There are 5 sheets in PDB entry 9DLG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 111first strand
Strand 2
B
79 84parallel
Strand 3
B
132 138parallel
Strand 4
B
170 174parallel
Strand 5
B
195 196parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 111first strand
Strand 2
A
79 84parallel
Strand 3
A
132 138parallel
Strand 4
A
170 174parallel
Strand 5
A
195 196parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 111first strand
Strand 2
C
79 84parallel
Strand 3
C
132 138parallel
Strand 4
C
170 174parallel
Strand 5
C
195 196parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
109 111first strand
Strand 2
D
79 84parallel
Strand 3
D
132 138parallel
Strand 4
D
170 174parallel
Strand 5
D
195 196parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
109 111first strand
Strand 2
E
79 84parallel
Strand 3
E
132 138parallel
Strand 4
E
170 174parallel
Strand 5
E
195 196parallel
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