Analysis of interatomic Contacts of Structural Units in PDB entry:
9DNC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DNC entry

There are 2 chains in PDB entry 9DNC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8ARG 191
B
 GLU 8ARG 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 9DNC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 26Right-handed alpha
Helix 2
AA2
A
27 29Right-handed 310
Helix 3
AA3
A
30 38Right-handed alpha
Helix 4
AA4
A
41 49Right-handed alpha
Helix 5
AA5
A
51 73Right-handed alpha
Helix 6
AA6
A
81 100Right-handed alpha
Helix 7
AA7
A
100 113Right-handed alpha
Helix 8
AA8
A
117 126Right-handed alpha
Helix 9
AA9
A
128 138Right-handed alpha
Helix 10
AB1
A
140 145Right-handed alpha
Helix 11
AB2
A
148 170Right-handed alpha
Helix 12
AB3
A
173 190Right-handed alpha
Helix 13
AB4
B
9 26Right-handed alpha
Helix 14
AB5
B
27 29Right-handed 310
Helix 15
AB6
B
30 38Right-handed alpha
Helix 16
AB7
B
41 49Right-handed alpha
Helix 17
AB8
B
51 75Right-handed alpha
Helix 18
AB9
B
81 100Right-handed alpha
Helix 19
AC1
B
100 113Right-handed alpha
Helix 20
AC2
B
117 126Right-handed alpha
Helix 21
AC3
B
128 136Right-handed alpha
Helix 22
AC4
B
140 145Right-handed alpha
Helix 23
AC5
B
148 170Right-handed alpha
Helix 24
AC6
B
173 190Right-handed alpha
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There are no sheets in PDB entry 9DNC
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