Analysis of interatomic Contacts of Structural Units in PDB entry:
9DRQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DRQ entry

There is 1 chain in PDB entry 9DRQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 0SER 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9DRQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 7Right-handed alpha
Helix 2
AA2
A
46 71Right-handed alpha
Helix 3
AA3
A
90 94Right-handed 310
Helix 4
AA4
A
97 110Right-handed alpha
Helix 5
AA5
A
110 119Right-handed alpha
Helix 6
AA6
A
120 127Right-handed alpha
Helix 7
AA7
A
148 158Right-handed alpha
Helix 8
AA8
A
164 184Right-handed alpha
Helix 9
AA9
A
185 187Right-handed 310
Helix 10
AB1
A
193 197Right-handed 310
Helix 11
AB2
A
200 209Right-handed alpha
Helix 12
AB3
A
211 219Right-handed alpha
Helix 13
AB4
A
225 233Right-handed alpha
Helix 14
AB5
A
322 330Right-handed alpha
Helix 15
AB6
A
332 336Right-handed 310
Helix 16
AB7
A
344 347Right-handed 310
Helix 17
AB8
A
417 421Right-handed 310
Helix 18
AB9
A
425 453Right-handed alpha
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There are 5 sheets in PDB entry 9DRQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 298first strand
Strand 2
A
288 292anti-parallel
Strand 3
A
265 271anti-parallel
Strand 4
A
10 20anti-parallel
Strand 5
A
310 313parallel
Strand 6
A
305 306anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 136first strand
Strand 2
A
139 145anti-parallel
Strand 3
A
24 32parallel
Strand 4
A
248 256anti-parallel
Strand 5
A
236 243anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 276first strand
Strand 2
A
279 283anti-parallel
Strand 3
A
338 340anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
355 358anti-parallel
Strand 3
A
383 385anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
365 367anti-parallel
Strand 3
A
392 395anti-parallel
Strand 4
A
398 401anti-parallel
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