Analysis of interatomic Contacts of Structural Units in PDB entry:
9DSF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DSF entry

There are 3 chains in PDB entry 9DSF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 13SER 168
B
 PRO 13SER 168
C
 SER 14SER 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9DSF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
30 44Right-handed alpha
Helix 3
AA3
A
44 59Right-handed alpha
Helix 4
AA4
A
59 64Right-handed alpha
Helix 5
AA5
A
67 74Right-handed alpha
Helix 6
AA6
A
74 93Right-handed alpha
Helix 7
AA7
A
94 112Right-handed alpha
Helix 8
AA8
A
115 136Right-handed alpha
Helix 9
AA9
A
141 165Right-handed alpha
Helix 10
AB1
A
166 168Right-handed 310
Helix 11
AB2
B
14 28Right-handed alpha
Helix 12
AB3
B
30 44Right-handed alpha
Helix 13
AB4
B
44 57Right-handed alpha
Helix 14
AB5
B
59 64Right-handed alpha
Helix 15
AB6
B
67 74Right-handed alpha
Helix 16
AB7
B
74 93Right-handed alpha
Helix 17
AB8
B
94 112Right-handed alpha
Helix 18
AB9
B
115 136Right-handed alpha
Helix 19
AC1
B
141 165Right-handed alpha
Helix 20
AC2
B
166 168Right-handed 310
Helix 21
AC3
C
15 28Right-handed alpha
Helix 22
AC4
C
30 44Right-handed alpha
Helix 23
AC5
C
44 59Right-handed alpha
Helix 24
AC6
C
59 64Right-handed alpha
Helix 25
AC7
C
67 74Right-handed alpha
Helix 26
AC8
C
74 93Right-handed alpha
Helix 27
AC9
C
94 112Right-handed alpha
Helix 28
AD1
C
115 136Right-handed alpha
Helix 29
AD2
C
141 164Right-handed alpha
Helix 30
AD3
C
165 168Right-handed 310
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There are no sheets in PDB entry 9DSF
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