Analysis of interatomic Contacts of Structural Units in PDB entry:
9DTG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9DTG entry

There are 2 chains in PDB entry 9DTG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 7	ALA 518
B	PRO 7	ALA 518

There are 33 helices in PDB entry 9DTG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	67	Right-handed alpha
Helix 2	AA2	A	67	76	Right-handed alpha
Helix 3	AA3	A	78	83	Right-handed 310
Helix 4	AA4	A	92	105	Right-handed alpha
Helix 5	AA5	A	112	115	Right-handed 310
Helix 6	AA6	A	116	125	Right-handed alpha
Helix 7	AA7	A	130	139	Right-handed alpha
Helix 8	AA8	A	149	155	Right-handed alpha
Helix 9	AA9	A	159	164	Right-handed alpha
Helix 10	AB1	A	173	178	Right-handed alpha
Helix 11	AB2	A	180	185	Right-handed alpha
Helix 12	AB3	A	187	195	Right-handed alpha
Helix 13	AB4	A	196	198	Right-handed 310
Helix 14	AB5	A	204	213	Right-handed alpha
Helix 15	AB6	A	221	230	Right-handed alpha
Helix 16	AB7	A	457	461	Right-handed 310
Helix 17	AB8	B	31	39	Right-handed alpha
Helix 18	AB9	B	59	67	Right-handed alpha
Helix 19	AC1	B	70	75	Right-handed alpha
Helix 20	AC2	B	92	104	Right-handed alpha
Helix 21	AC3	B	116	125	Right-handed alpha
Helix 22	AC4	B	129	132	Right-handed 310
Helix 23	AC5	B	133	139	Right-handed alpha
Helix 24	AC6	B	143	147	Right-handed 310
Helix 25	AC7	B	148	155	Right-handed alpha
Helix 26	AC8	B	159	164	Right-handed alpha
Helix 27	AC9	B	167	172	Right-handed alpha
Helix 28	AD1	B	173	180	Right-handed alpha
Helix 29	AD2	B	180	185	Right-handed alpha
Helix 30	AD3	B	187	196	Right-handed alpha
Helix 31	AD4	B	204	214	Right-handed alpha
Helix 32	AD5	B	219	223	Right-handed 310
Helix 33	AD6	B	326	330	Right-handed 310

There are 19 sheets in PDB entry 9DTG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	22	first strand
Strand 2	B	107	108	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	51	first strand
Strand 2	A	85	88	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	200	first strand
Strand 2	A	233	234	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	271	first strand
Strand 2	A	253	259	anti-parallel
Strand 3	A	243	244	anti-parallel
Strand 4	A	515	516	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	279	first strand
Strand 2	A	286	291	anti-parallel
Strand 3	A	282	283	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	279	first strand
Strand 2	A	286	291	anti-parallel
Strand 3	A	297	300	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	326	first strand
Strand 2	A	331	333	anti-parallel
Strand 3	A	350	352	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	374	first strand
Strand 2	A	381	383	anti-parallel
Strand 3	A	400	401	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	386	388	first strand
Strand 2	A	394	396	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	428	first strand
Strand 2	A	431	435	anti-parallel
Strand 3	A	442	444	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	472	first strand
Strand 2	A	475	478	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	49	first strand
Strand 2	B	56	58	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	233	234	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	272	first strand
Strand 2	B	252	257	anti-parallel
Strand 3	B	240	245	anti-parallel
Strand 4	B	515	517	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	277	283	first strand
Strand 2	B	286	291	anti-parallel
Strand 3	B	297	300	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	323	first strand
Strand 2	B	334	335	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	376	first strand
Strand 2	B	379	383	anti-parallel
Strand 3	B	401	403	anti-parallel
Strand 4	B	411	412	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	428	first strand
Strand 2	B	431	435	anti-parallel
Strand 3	B	442	444	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	467	472	first strand
Strand 2	B	475	480	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9DTG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9DTG