Analysis of interatomic Contacts of Structural Units in PDB entry:
9DVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DVL entry

There are 2 chains in PDB entry 9DVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 228ALA 625
B
 PRO 228ALA 625
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 9DVL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
230 258Right-handed alpha
Helix 2
AA2
A
267 296Right-handed alpha
Helix 3
AA3
A
298 303Right-handed alpha
Helix 4
AA4
A
312 337Right-handed alpha
Helix 5
AA5
A
345 360Right-handed alpha
Helix 6
AA6
A
367 383Right-handed alpha
Helix 7
AA7
A
390 402Right-handed alpha
Helix 8
AA8
A
403 419Right-handed alpha
Helix 9
AA9
A
438 443Right-handed alpha
Helix 10
AB1
A
445 453Right-handed alpha
Helix 11
AB2
A
453 471Right-handed alpha
Helix 12
AB3
A
472 502Right-handed alpha
Helix 13
AB4
A
506 532Right-handed alpha
Helix 14
AB5
A
555 582Right-handed alpha
Helix 15
AB6
A
588 618Right-handed alpha
Helix 16
AB7
B
230 258Right-handed alpha
Helix 17
AB8
B
267 296Right-handed alpha
Helix 18
AB9
B
298 303Right-handed alpha
Helix 19
AC1
B
312 337Right-handed alpha
Helix 20
AC2
B
345 360Right-handed alpha
Helix 21
AC3
B
367 383Right-handed alpha
Helix 22
AC4
B
390 403Right-handed alpha
Helix 23
AC5
B
403 420Right-handed alpha
Helix 24
AC6
B
438 443Right-handed alpha
Helix 25
AC7
B
445 471Right-handed alpha
Helix 26
AC8
B
472 502Right-handed alpha
Helix 27
AC9
B
506 532Right-handed alpha
Helix 28
AD1
B
555 582Right-handed alpha
Helix 29
AD2
B
587 618Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9DVL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il