Analysis of interatomic Contacts of Structural Units in PDB entry:
9DZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DZ6 entry

There are 2 chains in PDB entry 9DZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6GLU 1127
B
 VAL 10VAL 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 9DZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 18Right-handed alpha
Helix 2
AA2
A
22 38Right-handed alpha
Helix 3
AA3
A
41 53Right-handed alpha
Helix 4
AA4
A
56 74Right-handed alpha
Helix 5
AA5
A
79 96Right-handed alpha
Helix 6
AA6
A
102 121Right-handed alpha
Helix 7
AA7
A
122 127Right-handed 310
Helix 8
AA8
A
131 138Right-handed alpha
Helix 9
AA9
A
141 150Right-handed alpha
Helix 10
AB1
A
153 172Right-handed alpha
Helix 11
AB2
A
176 195Right-handed alpha
Helix 12
AB3
A
196 204Right-handed alpha
Helix 13
AB4
A
207 214Right-handed 310
Helix 14
AB5
A
220 235Right-handed alpha
Helix 15
AB6
A
236 249Right-handed alpha
Helix 16
AB7
A
255 262Right-handed alpha
Helix 17
AB8
A
263 274Right-handed alpha
Helix 18
AB9
A
276 293Right-handed alpha
Helix 19
AC1
A
297 310Right-handed alpha
Helix 20
AC2
A
311 323Right-handed alpha
Helix 21
AC3
A
334 347Right-handed alpha
Helix 22
AC4
A
348 355Right-handed 310
Helix 23
AC5
A
360 374Right-handed alpha
Helix 24
AC6
A
377 394Right-handed alpha
Helix 25
AC7
A
397 405Right-handed alpha
Helix 26
AC8
A
405 416Right-handed alpha
Helix 27
AC9
A
426 436Right-handed alpha
Helix 28
AD1
A
438 464Right-handed alpha
Helix 29
AD2
A
464 482Right-handed alpha
Helix 30
AD3
A
482 491Right-handed alpha
Helix 31
AD4
A
498 525Right-handed alpha
Helix 32
AD5
A
530 552Right-handed alpha
Helix 33
AD6
A
556 572Right-handed alpha
Helix 34
AD7
A
576 591Right-handed alpha
Helix 35
AD8
A
603 627Right-handed alpha
Helix 36
AD9
A
627 633Right-handed alpha
Helix 37
AE1
A
634 646Right-handed alpha
Helix 38
AE2
A
647 649Right-handed 310
Helix 39
AE3
A
650 668Right-handed alpha
Helix 40
AE4
A
672 686Right-handed alpha
Helix 41
AE5
A
690 697Right-handed alpha
Helix 42
AE6
A
699 708Right-handed alpha
Helix 43
AE7
A
708 719Right-handed alpha
Helix 44
AE8
A
733 751Right-handed alpha
Helix 45
AE9
A
752 764Right-handed alpha
Helix 46
AF1
A
769 785Right-handed alpha
Helix 47
AF2
A
787 802Right-handed alpha
Helix 48
AF3
A
803 810Right-handed 310
Helix 49
AF4
A
811 823Right-handed alpha
Helix 50
AF5
A
849 878Right-handed alpha
Helix 51
AF6
A
879 884Right-handed alpha
Helix 52
AF7
A
887 898Right-handed alpha
Helix 53
AF8
A
911 929Right-handed alpha
Helix 54
AF9
A
938 941Right-handed 310
Helix 55
AG1
A
942 960Right-handed alpha
Helix 56
AG2
A
979 1002Right-handed alpha
Helix 57
AG3
A
1018 1029Right-handed alpha
Helix 58
AG4
A
1030 1046Right-handed alpha
Helix 59
AG5
A
1049 1068Right-handed alpha
Helix 60
AG6
A
1074 1081Right-handed alpha
Helix 61
AG7
A
1081 1087Right-handed alpha
Helix 62
AG8
A
1100 1115Right-handed alpha
Helix 63
AG9
A
1121 1127Right-handed alpha
Helix 64
AH1
B
24 34Right-handed alpha
Helix 65
AH2
B
79 83Right-handed 310
Helix 66
AH3
B
96 102Right-handed alpha
Helix 67
AH4
B
102 112Right-handed alpha
Helix 68
AH5
B
134 138Right-handed 310
Helix 69
AH6
B
139 144Right-handed alpha
Helix 70
AH7
B
160 172Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9DZ6.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 56first strand
Strand 2
B
59 68anti-parallel
Strand 3
B
13 19parallel
Strand 4
B
87 93parallel
Strand 5
B
119 124parallel
Strand 6
B
147 150parallel
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