Analysis of interatomic Contacts of Structural Units in PDB entry:
9DZ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9DZ7 entry

There are 3 chains in PDB entry 9DZ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	SER 69	LYS 547
A	SER 69	GLN 548
C	SER 69	ILE 413

There are131 helices in PDB entry 9DZ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	72	87	Right-handed alpha
Helix 2	AA2	F	100	103	Right-handed 310
Helix 3	AA3	F	125	128	Right-handed 310
Helix 4	AA4	F	129	144	Right-handed alpha
Helix 5	AA5	F	157	171	Right-handed alpha
Helix 6	AA6	F	181	197	Right-handed alpha
Helix 7	AA7	F	209	220	Right-handed alpha
Helix 8	AA8	F	230	240	Right-handed alpha
Helix 9	AA9	F	263	275	Right-handed alpha
Helix 10	AB1	F	295	300	Right-handed alpha
Helix 11	AB2	F	301	309	Right-handed alpha
Helix 12	AB3	F	323	328	Right-handed alpha
Helix 13	AB4	F	349	360	Right-handed alpha
Helix 14	AB5	F	360	365	Right-handed alpha
Helix 15	AB6	F	370	386	Right-handed alpha
Helix 16	AB7	F	388	409	Right-handed alpha
Helix 17	AB8	F	426	441	Right-handed alpha
Helix 18	AB9	F	469	487	Right-handed alpha
Helix 19	AC1	F	491	498	Right-handed alpha
Helix 20	AC2	F	517	522	Right-handed alpha
Helix 21	AC3	F	523	528	Right-handed 310
Helix 22	AC4	F	529	533	Right-handed 310
Helix 23	AC5	A	72	87	Right-handed alpha
Helix 24	AC6	A	100	103	Right-handed 310
Helix 25	AC7	A	125	128	Right-handed 310
Helix 26	AC8	A	129	144	Right-handed alpha
Helix 27	AC9	A	157	171	Right-handed alpha
Helix 28	AD1	A	181	197	Right-handed alpha
Helix 29	AD2	A	209	220	Right-handed alpha
Helix 30	AD3	A	230	240	Right-handed alpha
Helix 31	AD4	A	263	275	Right-handed alpha
Helix 32	AD5	A	295	300	Right-handed alpha
Helix 33	AD6	A	301	309	Right-handed alpha
Helix 34	AD7	A	323	328	Right-handed alpha
Helix 35	AD8	A	349	360	Right-handed alpha
Helix 36	AD9	A	360	365	Right-handed alpha
Helix 37	AE1	A	370	386	Right-handed alpha
Helix 38	AE2	A	388	409	Right-handed alpha
Helix 39	AE3	A	426	441	Right-handed alpha
Helix 40	AE4	A	469	487	Right-handed alpha
Helix 41	AE5	A	491	498	Right-handed alpha
Helix 42	AE6	A	517	522	Right-handed alpha
Helix 43	AE7	A	523	528	Right-handed 310
Helix 44	AE8	A	529	533	Right-handed 310
Helix 45	AE9	C	72	87	Right-handed alpha
Helix 46	AF1	C	100	103	Right-handed 310
Helix 47	AF2	C	125	128	Right-handed 310
Helix 48	AF3	C	129	144	Right-handed alpha
Helix 49	AF4	C	157	171	Right-handed alpha
Helix 50	AF5	C	181	197	Right-handed alpha
Helix 51	AF6	C	209	220	Right-handed alpha
Helix 52	AF7	C	230	240	Right-handed alpha
Helix 53	AF8	C	263	275	Right-handed alpha
Helix 54	AF9	C	295	300	Right-handed alpha
Helix 55	AG1	C	301	309	Right-handed alpha
Helix 56	AG2	C	323	328	Right-handed alpha
Helix 57	AG3	C	349	360	Right-handed alpha
Helix 58	AG4	C	360	365	Right-handed alpha
Helix 59	AG5	C	370	386	Right-handed alpha
Helix 60	AG6	C	388	409	Right-handed alpha
Helix 61	AG7	C	426	441	Right-handed alpha
Helix 62	AG8	C	469	487	Right-handed alpha
Helix 63	AG9	C	491	498	Right-handed alpha
Helix 64	AH1	C	517	522	Right-handed alpha
Helix 65	AH2	C	523	528	Right-handed 310
Helix 66	AH3	C	529	533	Right-handed 310
Helix 67	AH4	E	72	87	Right-handed alpha
Helix 68	AH5	E	100	103	Right-handed 310
Helix 69	AH6	E	125	128	Right-handed 310
Helix 70	AH7	E	129	144	Right-handed alpha
Helix 71	AH8	E	157	171	Right-handed alpha
Helix 72	AH9	E	181	197	Right-handed alpha
Helix 73	AI1	E	209	220	Right-handed alpha
Helix 74	AI2	E	230	240	Right-handed alpha
Helix 75	AI3	E	263	275	Right-handed alpha
Helix 76	AI4	E	295	300	Right-handed alpha
Helix 77	AI5	E	301	309	Right-handed alpha
Helix 78	AI6	E	323	328	Right-handed alpha
Helix 79	AI7	E	349	360	Right-handed alpha
Helix 80	AI8	E	360	365	Right-handed alpha
Helix 81	AI9	E	370	386	Right-handed alpha
Helix 82	AJ1	E	388	409	Right-handed alpha
Helix 83	AJ2	E	426	441	Right-handed alpha
Helix 84	AJ3	E	469	487	Right-handed alpha
Helix 85	AJ4	E	491	498	Right-handed alpha
Helix 86	AJ5	E	517	522	Right-handed alpha
Helix 87	AJ6	E	523	528	Right-handed 310
Helix 88	AJ7	E	529	533	Right-handed 310
Helix 89	AJ8	D	72	87	Right-handed alpha
Helix 90	AJ9	D	100	103	Right-handed 310
Helix 91	AK1	D	125	128	Right-handed 310
Helix 92	AK2	D	129	144	Right-handed alpha
Helix 93	AK3	D	157	171	Right-handed alpha
Helix 94	AK4	D	181	197	Right-handed alpha
Helix 95	AK5	D	209	220	Right-handed alpha
Helix 96	AK6	D	230	240	Right-handed alpha
Helix 97	AK7	D	263	275	Right-handed alpha
Helix 98	AK8	D	295	300	Right-handed alpha
Helix 99	AK9	D	301	309	Right-handed alpha
Helix 100	AL1	D	323	328	Right-handed alpha
Helix 101	AL2	D	349	360	Right-handed alpha
Helix 102	AL3	D	360	365	Right-handed alpha
Helix 103	AL4	D	370	386	Right-handed alpha
Helix 104	AL5	D	388	409	Right-handed alpha
Helix 105	AL6	D	426	441	Right-handed alpha
Helix 106	AL7	D	469	487	Right-handed alpha
Helix 107	AL8	D	491	496	Right-handed alpha
Helix 108	AL9	D	517	522	Right-handed alpha
Helix 109	AM1	D	523	528	Right-handed 310
Helix 110	AM2	D	529	533	Right-handed 310
Helix 111	AM3	B	72	87	Right-handed alpha
Helix 112	AM4	B	100	103	Right-handed 310
Helix 113	AM5	B	125	128	Right-handed 310
Helix 114	AM6	B	129	144	Right-handed alpha
Helix 115	AM7	B	157	171	Right-handed alpha
Helix 116	AM8	B	181	197	Right-handed alpha
Helix 117	AM9	B	209	220	Right-handed alpha
Helix 118	AN1	B	230	240	Right-handed alpha
Helix 119	AN2	B	263	275	Right-handed alpha
Helix 120	AN3	B	295	300	Right-handed alpha
Helix 121	AN4	B	301	309	Right-handed alpha
Helix 122	AN5	B	323	328	Right-handed alpha
Helix 123	AN6	B	349	360	Right-handed alpha
Helix 124	AN7	B	360	365	Right-handed alpha
Helix 125	AN8	B	370	386	Right-handed alpha
Helix 126	AN9	B	388	409	Right-handed alpha
Helix 127	AO1	B	426	441	Right-handed alpha
Helix 128	AO2	B	469	487	Right-handed alpha
Helix 129	AO3	B	517	522	Right-handed alpha
Helix 130	AO4	B	523	528	Right-handed 310
Helix 131	AO5	B	529	533	Right-handed 310

There are 18 sheets in PDB entry 9DZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	97	98	first strand
Strand 2	F	105	107	anti-parallel
Strand 3	F	114	117	anti-parallel
Strand 4	F	443	444	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	179	first strand
Strand 2	F	344	348	anti-parallel
Strand 3	F	330	334	anti-parallel
Strand 4	F	276	281	parallel
Strand 5	F	247	252	parallel
Strand 6	F	201	205	parallel
Strand 7	F	222	226	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	420	423	first strand
Strand 2	F	459	462	anti-parallel
Strand 3	F	446	448	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	98	first strand
Strand 2	A	105	107	anti-parallel
Strand 3	A	114	117	anti-parallel
Strand 4	A	443	444	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	179	first strand
Strand 2	A	344	348	anti-parallel
Strand 3	A	330	334	anti-parallel
Strand 4	A	276	281	parallel
Strand 5	A	247	252	parallel
Strand 6	A	201	205	parallel
Strand 7	A	222	226	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	420	423	first strand
Strand 2	A	459	462	anti-parallel
Strand 3	A	446	448	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	98	first strand
Strand 2	C	105	107	anti-parallel
Strand 3	C	114	117	anti-parallel
Strand 4	C	443	444	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	179	first strand
Strand 2	C	344	348	anti-parallel
Strand 3	C	330	334	anti-parallel
Strand 4	C	276	281	parallel
Strand 5	C	247	252	parallel
Strand 6	C	201	205	parallel
Strand 7	C	222	226	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	420	423	first strand
Strand 2	C	459	462	anti-parallel
Strand 3	C	446	448	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	98	first strand
Strand 2	E	105	107	anti-parallel
Strand 3	E	114	117	anti-parallel
Strand 4	E	443	444	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	175	179	first strand
Strand 2	E	344	348	anti-parallel
Strand 3	E	330	334	anti-parallel
Strand 4	E	276	281	parallel
Strand 5	E	247	252	parallel
Strand 6	E	201	205	parallel
Strand 7	E	222	226	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	420	423	first strand
Strand 2	E	459	462	anti-parallel
Strand 3	E	446	448	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	98	first strand
Strand 2	D	105	107	anti-parallel
Strand 3	D	114	117	anti-parallel
Strand 4	D	443	444	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	179	first strand
Strand 2	D	344	348	anti-parallel
Strand 3	D	330	334	anti-parallel
Strand 4	D	276	281	parallel
Strand 5	D	247	252	parallel
Strand 6	D	201	205	parallel
Strand 7	D	222	226	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	420	423	first strand
Strand 2	D	459	462	anti-parallel
Strand 3	D	446	448	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	105	107	anti-parallel
Strand 3	B	114	117	anti-parallel
Strand 4	B	443	444	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	179	first strand
Strand 2	B	344	348	anti-parallel
Strand 3	B	330	334	anti-parallel
Strand 4	B	276	281	parallel
Strand 5	B	247	252	parallel
Strand 6	B	201	205	parallel
Strand 7	B	222	226	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	420	423	first strand
Strand 2	B	459	462	anti-parallel
Strand 3	B	447	448	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9DZ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9DZ7