Analysis of interatomic Contacts of Structural Units in PDB entry:
9DZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9DZM entry

There are 6 chains in PDB entry 9DZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 T 201 G 221
B
 T 201 A 222
C
 GLU 197SER 277
D
 PRO 199ASP 276
E
 LYS 300PRO 357
F
 LYS 300PRO 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 9DZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
198 219Right-handed alpha
Helix 2
AA2
C
222 235Right-handed alpha
Helix 3
AA3
C
239 249Right-handed alpha
Helix 4
AA4
C
252 277Right-handed alpha
Helix 5
AA5
D
201 219Right-handed alpha
Helix 6
AA6
D
222 235Right-handed alpha
Helix 7
AA7
D
239 249Right-handed alpha
Helix 8
AA8
D
252 272Right-handed alpha
Helix 9
AA9
E
305 319Right-handed alpha
Helix 10
AB1
E
323 335Right-handed alpha
Helix 11
AB2
E
337 353Right-handed alpha
Helix 12
AB3
F
306 319Right-handed alpha
Helix 13
AB4
F
323 335Right-handed alpha
Helix 14
AB5
F
337 353Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9DZM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il