Analysis of interatomic Contacts of Structural Units in PDB entry:
9E07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E07 entry

There are 6 chains in PDB entry 9E07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 SER 5PHE 20
A
 SER 4HIS 334
C
 SER 4HIS 334
E
 SER 4HIS 334
B
 SER 5PHE 20
D
 SER 5PHE 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9E07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
F
8 19Right-handed alpha
Helix 2
AA2
A
6 8Right-handed 310
Helix 3
AA3
A
9 33Right-handed alpha
Helix 4
AA4
A
33 60Right-handed alpha
Helix 5
AA5
A
165 183Right-handed alpha
Helix 6
AA6
A
183 195Right-handed alpha
Helix 7
AA7
A
202 228Right-handed alpha
Helix 8
AA8
A
228 240Right-handed alpha
Helix 9
AA9
A
251 269Right-handed alpha
Helix 10
AB1
A
270 281Right-handed alpha
Helix 11
AB2
A
285 292Right-handed alpha
Helix 12
AB3
A
293 307Right-handed alpha
Helix 13
AB4
A
311 333Right-handed alpha
Helix 14
AB5
C
6 8Right-handed 310
Helix 15
AB6
C
9 33Right-handed alpha
Helix 16
AB7
C
33 60Right-handed alpha
Helix 17
AB8
C
165 183Right-handed alpha
Helix 18
AB9
C
183 195Right-handed alpha
Helix 19
AC1
C
202 228Right-handed alpha
Helix 20
AC2
C
228 241Right-handed alpha
Helix 21
AC3
C
251 269Right-handed alpha
Helix 22
AC4
C
270 281Right-handed alpha
Helix 23
AC5
C
285 292Right-handed alpha
Helix 24
AC6
C
292 307Right-handed alpha
Helix 25
AC7
C
311 333Right-handed alpha
Helix 26
AC8
E
6 8Right-handed 310
Helix 27
AC9
E
9 33Right-handed alpha
Helix 28
AD1
E
33 60Right-handed alpha
Helix 29
AD2
E
165 183Right-handed alpha
Helix 30
AD3
E
183 195Right-handed alpha
Helix 31
AD4
E
202 228Right-handed alpha
Helix 32
AD5
E
228 241Right-handed alpha
Helix 33
AD6
E
251 282Right-handed alpha
Helix 34
AD7
E
285 292Right-handed alpha
Helix 35
AD8
E
293 308Right-handed alpha
Helix 36
AD9
E
311 333Right-handed alpha
Helix 37
AE1
B
8 19Right-handed alpha
Helix 38
AE2
D
8 19Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9E07.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 161first strand
Strand 2
A
246 250parallel
Strand 3
E
158 161parallel
Strand 4
E
246 250parallel
Strand 5
C
158 161parallel
Strand 6
C
246 250parallel
Strand 7
A
158 161parallel
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