Analysis of interatomic Contacts of Structural Units in PDB entry:
9E0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E0S entry

There are 3 chains in PDB entry 9E0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLN 185
B
 GLY 2GLN 185
C
 GLY 2GLN 185
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9E0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 37Right-handed alpha
Helix 2
AA2
A
39 57Right-handed alpha
Helix 3
AA3
A
70 94Right-handed alpha
Helix 4
AA4
A
97 117Right-handed alpha
Helix 5
AA5
A
119 135Right-handed alpha
Helix 6
AA6
A
136 138Right-handed 310
Helix 7
AA7
A
141 165Right-handed alpha
Helix 8
AA8
A
167 184Right-handed alpha
Helix 9
AA9
B
14 36Right-handed alpha
Helix 10
AB1
B
39 58Right-handed alpha
Helix 11
AB2
B
70 94Right-handed alpha
Helix 12
AB3
B
97 117Right-handed alpha
Helix 13
AB4
B
119 134Right-handed alpha
Helix 14
AB5
B
135 140Right-handed 310
Helix 15
AB6
B
141 184Right-handed alpha
Helix 16
AB7
C
12 37Right-handed alpha
Helix 17
AB8
C
39 59Right-handed alpha
Helix 18
AB9
C
70 94Right-handed alpha
Helix 19
AC1
C
97 117Right-handed alpha
Helix 20
AC2
C
119 134Right-handed alpha
Helix 21
AC3
C
135 140Right-handed 310
Helix 22
AC4
C
141 165Right-handed alpha
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There are 2 sheets in PDB entry 9E0S. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 7first strand
Strand 2
C
171 173anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 179first strand
Strand 2
C
182 184anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il