Analysis of interatomic Contacts of Structural Units in PDB entry:
9E0T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9E0T entry

There are 3 chains in PDB entry 9E0T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1444	GLU 4646
B	ARG 89	ARG 410
C	ARG 89	ARG 410

There are124 helices in PDB entry 9E0T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1444	1472	Right-handed alpha
Helix 2	AA2	A	1489	1510	Right-handed alpha
Helix 3	AA3	A	1512	1515	Right-handed 310
Helix 4	AA4	A	1516	1554	Right-handed alpha
Helix 5	AA5	A	1561	1585	Right-handed alpha
Helix 6	AA6	A	1587	1593	Right-handed alpha
Helix 7	AA7	A	1596	1615	Right-handed alpha
Helix 8	AA8	A	1616	1624	Right-handed alpha
Helix 9	AA9	A	1626	1632	Right-handed 310
Helix 10	AB1	A	1633	1643	Right-handed alpha
Helix 11	AB2	A	1647	1652	Right-handed 310
Helix 12	AB3	A	1653	1658	Right-handed alpha
Helix 13	AB4	A	1697	1728	Right-handed alpha
Helix 14	AB5	A	1734	1745	Right-handed alpha
Helix 15	AB6	A	1746	1767	Right-handed alpha
Helix 16	AB7	A	1776	1797	Right-handed alpha
Helix 17	AB8	A	1801	1828	Right-handed alpha
Helix 18	AB9	A	1835	1841	Right-handed alpha
Helix 19	AC1	A	1852	1855	Right-handed 310
Helix 20	AC2	A	1882	1898	Right-handed alpha
Helix 21	AC3	A	1912	1923	Right-handed alpha
Helix 22	AC4	A	1937	1952	Right-handed alpha
Helix 23	AC5	A	1964	1987	Right-handed alpha
Helix 24	AC6	A	2029	2034	Right-handed alpha
Helix 25	AC7	A	2045	2058	Right-handed alpha
Helix 26	AC8	A	2061	2080	Right-handed alpha
Helix 27	AC9	A	2089	2114	Right-handed alpha
Helix 28	AD1	A	2132	2146	Right-handed alpha
Helix 29	AD2	A	2153	2165	Right-handed alpha
Helix 30	AD3	A	2175	2189	Right-handed alpha
Helix 31	AD4	A	2200	2217	Right-handed alpha
Helix 32	AD5	A	2229	2246	Right-handed alpha
Helix 33	AD6	A	2260	2265	Right-handed alpha
Helix 34	AD7	A	2278	2290	Right-handed alpha
Helix 35	AD8	A	2311	2314	Right-handed 310
Helix 36	AD9	A	2315	2320	Right-handed alpha
Helix 37	AE1	A	2352	2357	Right-handed alpha
Helix 38	AE2	A	2370	2384	Right-handed alpha
Helix 39	AE3	A	2410	2428	Right-handed alpha
Helix 40	AE4	A	2432	2443	Right-handed alpha
Helix 41	AE5	A	2450	2476	Right-handed alpha
Helix 42	AE6	A	2482	2503	Right-handed alpha
Helix 43	AE7	A	2507	2522	Right-handed alpha
Helix 44	AE8	A	2533	2535	Right-handed 310
Helix 45	AE9	A	2571	2587	Right-handed alpha
Helix 46	AF1	A	2600	2611	Right-handed alpha
Helix 47	AF2	A	2628	2638	Right-handed alpha
Helix 48	AF3	A	2677	2689	Right-handed alpha
Helix 49	AF4	A	2724	2729	Right-handed alpha
Helix 50	AF5	A	2739	2756	Right-handed alpha
Helix 51	AF6	A	2762	2764	Right-handed 310
Helix 52	AF7	A	2765	2784	Right-handed alpha
Helix 53	AF8	A	2795	2811	Right-handed alpha
Helix 54	AF9	A	2817	2834	Right-handed alpha
Helix 55	AG1	A	2839	2858	Right-handed alpha
Helix 56	AG2	A	2862	2867	Right-handed alpha
Helix 57	AG3	A	2885	2904	Right-handed alpha
Helix 58	AG4	A	2912	2928	Right-handed alpha
Helix 59	AG5	A	2942	2954	Right-handed alpha
Helix 60	AG6	A	2968	2985	Right-handed alpha
Helix 61	AG7	A	2997	2999	Right-handed 310
Helix 62	AG8	A	3001	3015	Right-handed alpha
Helix 63	AG9	A	3023	3041	Right-handed alpha
Helix 64	AH1	A	3047	3061	Right-handed alpha
Helix 65	AH2	A	3071	3082	Right-handed alpha
Helix 66	AH3	A	3083	3088	Right-handed alpha
Helix 67	AH4	A	3098	3110	Right-handed alpha
Helix 68	AH5	A	3138	3165	Right-handed alpha
Helix 69	AH6	A	3172	3240	Right-handed alpha
Helix 70	AH7	A	3451	3500	Right-handed alpha
Helix 71	AH8	A	3502	3517	Right-handed alpha
Helix 72	AH9	A	3521	3539	Right-handed alpha
Helix 73	AI1	A	3555	3565	Right-handed alpha
Helix 74	AI2	A	3570	3582	Right-handed alpha
Helix 75	AI3	A	3594	3604	Right-handed alpha
Helix 76	AI4	A	3616	3618	Right-handed 310
Helix 77	AI5	A	3619	3630	Right-handed alpha
Helix 78	AI6	A	3642	3644	Right-handed 310
Helix 79	AI7	A	3645	3651	Right-handed alpha
Helix 80	AI8	A	3689	3696	Right-handed alpha
Helix 81	AI9	A	3704	3721	Right-handed alpha
Helix 82	AJ1	A	3721	3755	Right-handed alpha
Helix 83	AJ2	A	3759	3763	Right-handed 310
Helix 84	AJ3	A	3764	3818	Right-handed alpha
Helix 85	AJ4	A	3819	3821	Right-handed 310
Helix 86	AJ5	A	3828	3840	Right-handed alpha
Helix 87	AJ6	A	3851	3873	Right-handed alpha
Helix 88	AJ7	A	3879	3894	Right-handed alpha
Helix 89	AJ8	A	3901	3911	Right-handed alpha
Helix 90	AJ9	A	3928	3939	Right-handed alpha
Helix 91	AK1	A	3946	3954	Right-handed alpha
Helix 92	AK2	A	3981	3997	Right-handed alpha
Helix 93	AK3	A	4000	4014	Right-handed alpha
Helix 94	AK4	A	4018	4023	Right-handed alpha
Helix 95	AK5	A	4026	4034	Right-handed alpha
Helix 96	AK6	A	4051	4063	Right-handed alpha
Helix 97	AK7	A	4073	4090	Right-handed alpha
Helix 98	AK8	A	4098	4101	Right-handed 310
Helix 99	AK9	A	4102	4115	Right-handed alpha
Helix 100	AL1	A	4135	4142	Right-handed alpha
Helix 101	AL2	A	4152	4164	Right-handed alpha
Helix 102	AL3	A	4165	4170	Right-handed alpha
Helix 103	AL4	A	4175	4193	Right-handed alpha
Helix 104	AL5	A	4208	4227	Right-handed alpha
Helix 105	AL6	A	4234	4238	Right-handed 310
Helix 106	AL7	A	4239	4250	Right-handed alpha
Helix 107	AL8	A	4252	4256	Right-handed 310
Helix 108	AL9	A	4258	4273	Right-handed alpha
Helix 109	AM1	A	4274	4279	Right-handed alpha
Helix 110	AM2	A	4301	4311	Right-handed alpha
Helix 111	AM3	A	4324	4327	Right-handed 310
Helix 112	AM4	A	4328	4348	Right-handed alpha
Helix 113	AM5	A	4380	4391	Right-handed alpha
Helix 114	AM6	A	4392	4395	Right-handed 310
Helix 115	AM7	A	4407	4439	Right-handed alpha
Helix 116	AM8	A	4445	4458	Right-handed alpha
Helix 117	AM9	A	4474	4498	Right-handed alpha
Helix 118	AN1	A	4516	4533	Right-handed alpha
Helix 119	AN2	A	4535	4539	Right-handed 310
Helix 120	AN3	A	4631	4638	Right-handed alpha
Helix 121	AN4	B	90	94	Right-handed 310
Helix 122	AN5	B	286	297	Right-handed alpha
Helix 123	AN6	C	90	94	Right-handed 310
Helix 124	AN7	C	289	297	Right-handed alpha

There are 37 sheets in PDB entry 9E0T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1477	1480	first strand
Strand 2	A	1484	1487	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1663	1666	first strand
Strand 2	A	1672	1677	anti-parallel
Strand 3	A	1683	1691	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1843	1846	first strand
Strand 2	A	1857	1861	anti-parallel
Strand 3	A	1864	1867	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1901	1905	first strand
Strand 2	A	2036	2040	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1927	1928	first strand
Strand 2	A	1954	1958	parallel
Strand 3	A	2013	2017	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1998	2000	first strand
Strand 2	A	2005	2007	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2249	2254	first strand
Strand 2	A	2298	2303	parallel
Strand 3	A	2339	2345	parallel
Strand 4	A	2220	2223	parallel
Strand 5	A	2360	2363	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2266	2268	first strand
Strand 2	A	2275	2277	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2324	2326	first strand
Strand 2	A	2332	2334	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2537	2539	first strand
Strand 2	A	2545	2547	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2615	2620	first strand
Strand 2	A	2658	2663	parallel
Strand 3	A	2706	2712	parallel
Strand 4	A	2591	2594	parallel
Strand 5	A	2733	2735	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2639	2644	first strand
Strand 2	A	2647	2652	anti-parallel
Strand 3	A	2699	2703	parallel
Strand 4	A	2691	2694	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2873	2874	first strand
Strand 2	A	2882	2883	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2957	2959	first strand
Strand 2	A	2990	2995	parallel
Strand 3	A	3062	3068	parallel
Strand 4	A	2933	2936	parallel
Strand 5	A	3090	3093	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3610	3613	first strand
Strand 2	A	3633	3636	parallel
Strand 3	A	3677	3681	parallel
Strand 4	A	3587	3590	parallel
Strand 5	A	3697	3700	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3654	3656	first strand
Strand 2	A	3659	3664	anti-parallel
Strand 3	A	3667	3670	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4067	4070	first strand
Strand 2	A	4094	4097	parallel
Strand 3	A	4124	4129	parallel
Strand 4	A	4041	4045	parallel
Strand 5	A	4143	4144	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4283	4288	first strand
Strand 2	A	4292	4295	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4508	4510	first strand
Strand 2	A	4558	4561	parallel
Strand 3	A	4588	4593	anti-parallel
Strand 4	A	4540	4545	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4564	4565	first strand
Strand 2	A	4642	4643	anti-parallel
Strand 3	A	4604	4610	parallel
Strand 4	A	4618	4625	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4568	4570	first strand
Strand 2	A	4575	4577	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	96	first strand
Strand 2	B	403	410	anti-parallel
Strand 3	B	102	105	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	96	first strand
Strand 2	B	403	410	anti-parallel
Strand 3	B	394	399	anti-parallel
Strand 4	B	383	388	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	116	first strand
Strand 2	B	123	127	anti-parallel
Strand 3	B	132	136	anti-parallel
Strand 4	B	141	146	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	157	first strand
Strand 2	B	164	169	anti-parallel
Strand 3	B	174	178	anti-parallel
Strand 4	B	184	188	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	195	199	first strand
Strand 2	B	206	211	anti-parallel
Strand 3	B	215	220	anti-parallel
Strand 4	B	226	231	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	242	first strand
Strand 2	B	248	253	anti-parallel
Strand 3	B	260	262	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	284	first strand
Strand 2	B	310	315	anti-parallel
Strand 3	B	320	324	anti-parallel
Strand 4	B	330	334	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	346	first strand
Strand 2	B	353	357	anti-parallel
Strand 3	B	361	365	anti-parallel
Strand 4	B	374	377	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	C	403	410	anti-parallel
Strand 3	C	102	105	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	C	403	410	anti-parallel
Strand 3	C	394	397	anti-parallel
Strand 4	C	387	388	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	116	first strand
Strand 2	C	123	127	anti-parallel
Strand 3	C	131	136	anti-parallel
Strand 4	C	141	147	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	158	first strand
Strand 2	C	164	169	anti-parallel
Strand 3	C	174	178	anti-parallel
Strand 4	C	184	188	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	195	200	first strand
Strand 2	C	206	211	anti-parallel
Strand 3	C	215	220	anti-parallel
Strand 4	C	225	231	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	242	first strand
Strand 2	C	248	253	anti-parallel
Strand 3	C	258	262	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	279	284	first strand
Strand 2	C	310	315	anti-parallel
Strand 3	C	319	324	anti-parallel
Strand 4	C	329	335	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	345	first strand
Strand 2	C	353	357	anti-parallel
Strand 3	C	362	365	anti-parallel
Strand 4	C	372	376	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9E0T

Analysis of interatomic Contacts of Structural Units in PDB entry:
9E0T