Analysis of interatomic Contacts of Structural Units in PDB entry:
9E1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E1T entry

There are 2 chains in PDB entry 9E1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 134ALA 752
B
 LYS 134ALA 752
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 9E1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 164Right-handed alpha
Helix 2
AA2
A
175 190Right-handed alpha
Helix 3
AA3
A
204 209Right-handed alpha
Helix 4
AA4
A
217 225Right-handed 310
Helix 5
AA5
A
226 231Right-handed alpha
Helix 6
AA6
A
250 257Right-handed alpha
Helix 7
AA7
A
258 261Right-handed 310
Helix 8
AA8
A
304 310Right-handed alpha
Helix 9
AA9
A
311 328Right-handed alpha
Helix 10
AB1
A
333 345Right-handed alpha
Helix 11
AB2
A
353 357Right-handed 310
Helix 12
AB3
A
372 376Right-handed 310
Helix 13
AB4
A
396 406Right-handed alpha
Helix 14
AB5
A
408 413Right-handed 310
Helix 15
AB6
A
424 437Right-handed alpha
Helix 16
AB7
A
443 452Right-handed alpha
Helix 17
AB8
A
481 483Right-handed 310
Helix 18
AB9
A
484 495Right-handed alpha
Helix 19
AC1
A
506 519Right-handed alpha
Helix 20
AC2
A
520 526Right-handed alpha
Helix 21
AC3
A
542 553Right-handed alpha
Helix 22
AC4
A
571 584Right-handed alpha
Helix 23
AC5
A
609 619Right-handed alpha
Helix 24
AC6
A
630 637Right-handed 310
Helix 25
AC7
A
638 645Right-handed alpha
Helix 26
AC8
A
679 691Right-handed alpha
Helix 27
AC9
A
711 717Right-handed alpha
Helix 28
AD1
A
721 743Right-handed alpha
Helix 29
AD2
A
744 750Right-handed 310
Helix 30
AD3
B
146 164Right-handed alpha
Helix 31
AD4
B
175 190Right-handed alpha
Helix 32
AD5
B
204 209Right-handed alpha
Helix 33
AD6
B
217 225Right-handed 310
Helix 34
AD7
B
226 231Right-handed alpha
Helix 35
AD8
B
250 257Right-handed alpha
Helix 36
AD9
B
258 261Right-handed 310
Helix 37
AE1
B
304 310Right-handed alpha
Helix 38
AE2
B
311 328Right-handed alpha
Helix 39
AE3
B
333 345Right-handed alpha
Helix 40
AE4
B
353 357Right-handed 310
Helix 41
AE5
B
372 376Right-handed 310
Helix 42
AE6
B
396 406Right-handed alpha
Helix 43
AE7
B
408 413Right-handed 310
Helix 44
AE8
B
424 437Right-handed alpha
Helix 45
AE9
B
443 452Right-handed alpha
Helix 46
AF1
B
481 483Right-handed 310
Helix 47
AF2
B
484 495Right-handed alpha
Helix 48
AF3
B
506 519Right-handed alpha
Helix 49
AF4
B
520 526Right-handed alpha
Helix 50
AF5
B
542 553Right-handed alpha
Helix 51
AF6
B
571 584Right-handed alpha
Helix 52
AF7
B
609 619Right-handed alpha
Helix 53
AF8
B
630 637Right-handed 310
Helix 54
AF9
B
638 645Right-handed alpha
Helix 55
AG1
B
679 691Right-handed alpha
Helix 56
AG2
B
711 717Right-handed alpha
Helix 57
AG3
B
721 743Right-handed alpha
Helix 58
AG4
B
744 750Right-handed 310
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There are 8 sheets in PDB entry 9E1T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 200first strand
Strand 2
A
168 174parallel
Strand 3
A
138 144parallel
Strand 4
A
237 241parallel
Strand 5
A
295 303anti-parallel
Strand 6
A
267 271anti-parallel
Strand 7
A
349 351parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 247first strand
Strand 2
A
378 380anti-parallel
Strand 3
A
358 359parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
A
529 534anti-parallel
Strand 3
A
499 503parallel
Strand 4
A
474 480parallel
Strand 5
A
558 561parallel
Strand 6
A
660 664anti-parallel
Strand 7
A
590 594anti-parallel
Strand 8
A
694 697parallel
Strand 9
A
649 651anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 568first strand
Strand 2
A
703 705anti-parallel
Strand 3
A
596 598parallel
Strand 4
A
623 624anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 200first strand
Strand 2
B
168 174parallel
Strand 3
B
138 144parallel
Strand 4
B
237 241parallel
Strand 5
B
295 303anti-parallel
Strand 6
B
267 271anti-parallel
Strand 7
B
349 351parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 247first strand
Strand 2
B
378 380anti-parallel
Strand 3
B
358 359parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
456 457first strand
Strand 2
B
529 534anti-parallel
Strand 3
B
499 503parallel
Strand 4
B
474 480parallel
Strand 5
B
558 561parallel
Strand 6
B
660 664anti-parallel
Strand 7
B
590 594anti-parallel
Strand 8
B
694 697parallel
Strand 9
B
649 651anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 568first strand
Strand 2
B
703 705anti-parallel
Strand 3
B
596 598parallel
Strand 4
B
623 624anti-parallel
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