Analysis of interatomic Contacts of Structural Units in PDB entry:
9E2B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9E2B entry

There are 5 chains in PDB entry 9E2B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 22	LYS 273
B	GLY 22	LYS 273
C	GLU 16	LYS 273
D	GLN 21	LYS 273
E	LYS 23	LEU 255

There are 79 helices in PDB entry 9E2B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	32	Right-handed alpha
Helix 2	AA2	A	33	42	Right-handed alpha
Helix 3	AA3	A	65	79	Right-handed alpha
Helix 4	AA4	A	88	90	Right-handed 310
Helix 5	AA5	A	91	98	Right-handed alpha
Helix 6	AA6	A	113	117	Right-handed 310
Helix 7	AA7	A	143	148	Right-handed 310
Helix 8	AA8	A	160	170	Right-handed alpha
Helix 9	AA9	A	180	190	Right-handed alpha
Helix 10	AB1	A	201	210	Right-handed alpha
Helix 11	AB2	A	235	252	Right-handed alpha
Helix 12	AB3	A	253	265	Right-handed alpha
Helix 13	AB4	A	268	272	Right-handed 310
Helix 14	AB5	B	23	32	Right-handed alpha
Helix 15	AB6	B	33	42	Right-handed alpha
Helix 16	AB7	B	65	79	Right-handed alpha
Helix 17	AB8	B	88	90	Right-handed 310
Helix 18	AB9	B	91	98	Right-handed alpha
Helix 19	AC1	B	113	117	Right-handed 310
Helix 20	AC2	B	143	148	Right-handed 310
Helix 21	AC3	B	160	170	Right-handed alpha
Helix 22	AC4	B	180	190	Right-handed alpha
Helix 23	AC5	B	201	210	Right-handed alpha
Helix 24	AC6	B	235	252	Right-handed alpha
Helix 25	AC7	B	253	265	Right-handed alpha
Helix 26	AC8	B	268	272	Right-handed 310
Helix 27	AC9	C	17	21	Right-handed alpha
Helix 28	AD1	C	24	32	Right-handed alpha
Helix 29	AD2	C	33	42	Right-handed alpha
Helix 30	AD3	C	65	79	Right-handed alpha
Helix 31	AD4	C	88	90	Right-handed 310
Helix 32	AD5	C	91	98	Right-handed alpha
Helix 33	AD6	C	113	117	Right-handed 310
Helix 34	AD7	C	143	148	Right-handed 310
Helix 35	AD8	C	160	170	Right-handed alpha
Helix 36	AD9	C	180	190	Right-handed alpha
Helix 37	AE1	C	201	210	Right-handed alpha
Helix 38	AE2	C	235	252	Right-handed alpha
Helix 39	AE3	C	253	265	Right-handed alpha
Helix 40	AE4	C	268	272	Right-handed 310
Helix 41	AE5	D	23	32	Right-handed alpha
Helix 42	AE6	D	33	42	Right-handed alpha
Helix 43	AE7	D	65	79	Right-handed alpha
Helix 44	AE8	D	88	90	Right-handed 310
Helix 45	AE9	D	91	98	Right-handed alpha
Helix 46	AF1	D	113	117	Right-handed 310
Helix 47	AF2	D	143	148	Right-handed alpha
Helix 48	AF3	D	160	170	Right-handed alpha
Helix 49	AF4	D	180	190	Right-handed alpha
Helix 50	AF5	D	201	210	Right-handed alpha
Helix 51	AF6	D	235	252	Right-handed alpha
Helix 52	AF7	D	253	265	Right-handed alpha
Helix 53	AF8	D	268	272	Right-handed 310
Helix 54	AF9	E	24	32	Right-handed alpha
Helix 55	AG1	E	33	42	Right-handed alpha
Helix 56	AG2	E	65	79	Right-handed alpha
Helix 57	AG3	E	88	90	Right-handed 310
Helix 58	AG4	E	91	98	Right-handed alpha
Helix 59	AG5	E	113	117	Right-handed 310
Helix 60	AG6	E	143	148	Right-handed 310
Helix 61	AG7	E	160	170	Right-handed alpha
Helix 62	AG8	E	180	190	Right-handed alpha
Helix 63	AG9	E	201	210	Right-handed alpha
Helix 64	AH1	E	235	252	Right-handed alpha
Helix 65	AH2	E	253	265	Right-handed alpha
Helix 66	AH3	E	268	272	Right-handed 310
Helix 67	AH4	F	23	32	Right-handed alpha
Helix 68	AH5	F	33	42	Right-handed alpha
Helix 69	AH6	F	65	79	Right-handed alpha
Helix 70	AH7	F	88	90	Right-handed 310
Helix 71	AH8	F	91	98	Right-handed alpha
Helix 72	AH9	F	113	117	Right-handed 310
Helix 73	AI1	F	144	148	Right-handed 310
Helix 74	AI2	F	160	170	Right-handed alpha
Helix 75	AI3	F	180	190	Right-handed alpha
Helix 76	AI4	F	201	210	Right-handed alpha
Helix 77	AI5	F	235	252	Right-handed alpha
Helix 78	AI6	F	253	265	Right-handed alpha
Helix 79	AI7	F	268	272	Right-handed 310

There are 30 sheets in PDB entry 9E2B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	86	first strand
Strand 2	A	43	48	parallel
Strand 3	A	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	57	first strand
Strand 2	A	63	64	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	120	first strand
Strand 2	A	230	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	178	first strand
Strand 2	A	153	157	parallel
Strand 3	A	195	199	parallel
Strand 4	A	129	134	anti-parallel
Strand 5	A	214	215	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	86	first strand
Strand 2	B	43	48	parallel
Strand 3	B	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	57	first strand
Strand 2	B	63	64	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	120	first strand
Strand 2	B	230	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	127	first strand
Strand 2	B	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	178	first strand
Strand 2	B	153	157	parallel
Strand 3	B	195	199	parallel
Strand 4	B	129	134	anti-parallel
Strand 5	B	214	215	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	86	first strand
Strand 2	C	43	48	parallel
Strand 3	C	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	57	first strand
Strand 2	C	63	64	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	120	first strand
Strand 2	C	230	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	178	first strand
Strand 2	C	153	157	parallel
Strand 3	C	195	199	parallel
Strand 4	C	129	134	anti-parallel
Strand 5	C	214	215	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	86	first strand
Strand 2	D	43	48	parallel
Strand 3	D	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	57	first strand
Strand 2	D	63	64	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	120	first strand
Strand 2	D	230	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	174	178	first strand
Strand 2	D	153	157	parallel
Strand 3	D	195	199	parallel
Strand 4	D	129	134	anti-parallel
Strand 5	D	214	215	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	86	first strand
Strand 2	E	43	48	parallel
Strand 3	E	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	57	first strand
Strand 2	E	63	64	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	119	120	first strand
Strand 2	E	230	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	127	first strand
Strand 2	E	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	174	178	first strand
Strand 2	E	153	157	parallel
Strand 3	E	195	199	parallel
Strand 4	E	129	134	anti-parallel
Strand 5	E	214	215	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	81	86	first strand
Strand 2	F	43	48	parallel
Strand 3	F	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	57	first strand
Strand 2	F	63	64	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	119	120	first strand
Strand 2	F	230	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	125	127	first strand
Strand 2	F	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	174	178	first strand
Strand 2	F	153	157	parallel
Strand 3	F	195	199	parallel
Strand 4	F	129	134	anti-parallel
Strand 5	F	214	215	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9E2B

Analysis of interatomic Contacts of Structural Units in PDB entry:
9E2B