Analysis of interatomic Contacts of Structural Units in PDB entry:
9E2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E2H entry

There are 6 chains in PDB entry 9E2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 426GLY 710
B
 ILE 425GLY 710
C
 ILE 425THR 709
D
 ILE 425GLY 710
E
 LEU 426THR 709
F
 ILE 425GLY 710
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 9E2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
432 440Right-handed alpha
Helix 2
AA2
A
445 459Right-handed alpha
Helix 3
AA3
A
461 488Right-handed alpha
Helix 4
AA4
A
498 503Right-handed alpha
Helix 5
AA5
A
503 523Right-handed alpha
Helix 6
AA6
A
524 526Right-handed 310
Helix 7
AA7
A
527 555Right-handed alpha
Helix 8
AA8
A
559 571Right-handed alpha
Helix 9
AA9
A
572 586Right-handed alpha
Helix 10
AB1
A
594 619Right-handed alpha
Helix 11
AB2
A
637 647Right-handed alpha
Helix 12
AB3
A
650 663Right-handed alpha
Helix 13
AB4
A
667 679Right-handed alpha
Helix 14
AB5
A
682 710Right-handed alpha
Helix 15
AB6
B
433 439Right-handed alpha
Helix 16
AB7
B
445 455Right-handed alpha
Helix 17
AB8
B
461 486Right-handed alpha
Helix 18
AB9
B
498 501Right-handed 310
Helix 19
AC1
B
503 524Right-handed alpha
Helix 20
AC2
B
527 554Right-handed alpha
Helix 21
AC3
B
559 571Right-handed alpha
Helix 22
AC4
B
572 586Right-handed alpha
Helix 23
AC5
B
594 619Right-handed alpha
Helix 24
AC6
B
637 647Right-handed alpha
Helix 25
AC7
B
650 664Right-handed alpha
Helix 26
AC8
B
667 682Right-handed alpha
Helix 27
AC9
B
682 709Right-handed alpha
Helix 28
AD1
C
432 440Right-handed alpha
Helix 29
AD2
C
445 458Right-handed alpha
Helix 30
AD3
C
461 486Right-handed alpha
Helix 31
AD4
C
498 501Right-handed 310
Helix 32
AD5
C
503 523Right-handed alpha
Helix 33
AD6
C
524 526Right-handed 310
Helix 34
AD7
C
527 554Right-handed alpha
Helix 35
AD8
C
559 571Right-handed alpha
Helix 36
AD9
C
571 585Right-handed alpha
Helix 37
AE1
C
594 619Right-handed alpha
Helix 38
AE2
C
637 647Right-handed alpha
Helix 39
AE3
C
650 664Right-handed alpha
Helix 40
AE4
C
667 681Right-handed alpha
Helix 41
AE5
C
682 709Right-handed alpha
Helix 42
AE6
D
432 440Right-handed alpha
Helix 43
AE7
D
445 455Right-handed alpha
Helix 44
AE8
D
461 488Right-handed alpha
Helix 45
AE9
D
498 501Right-handed 310
Helix 46
AF1
D
503 524Right-handed alpha
Helix 47
AF2
D
527 555Right-handed alpha
Helix 48
AF3
D
559 571Right-handed alpha
Helix 49
AF4
D
572 585Right-handed alpha
Helix 50
AF5
D
593 615Right-handed alpha
Helix 51
AF6
D
637 647Right-handed alpha
Helix 52
AF7
D
650 662Right-handed alpha
Helix 53
AF8
D
667 682Right-handed alpha
Helix 54
AF9
D
682 709Right-handed alpha
Helix 55
AG1
E
432 441Right-handed alpha
Helix 56
AG2
E
445 459Right-handed alpha
Helix 57
AG3
E
461 488Right-handed alpha
Helix 58
AG4
E
498 503Right-handed alpha
Helix 59
AG5
E
503 523Right-handed alpha
Helix 60
AG6
E
524 526Right-handed 310
Helix 61
AG7
E
527 555Right-handed alpha
Helix 62
AG8
E
559 571Right-handed alpha
Helix 63
AG9
E
571 586Right-handed alpha
Helix 64
AH1
E
594 619Right-handed alpha
Helix 65
AH2
E
637 647Right-handed alpha
Helix 66
AH3
E
650 664Right-handed alpha
Helix 67
AH4
E
667 682Right-handed alpha
Helix 68
AH5
E
682 709Right-handed alpha
Helix 69
AH6
F
432 441Right-handed alpha
Helix 70
AH7
F
445 459Right-handed alpha
Helix 71
AH8
F
461 487Right-handed alpha
Helix 72
AH9
F
498 501Right-handed 310
Helix 73
AI1
F
503 524Right-handed alpha
Helix 74
AI2
F
527 555Right-handed alpha
Helix 75
AI3
F
559 571Right-handed alpha
Helix 76
AI4
F
571 586Right-handed alpha
Helix 77
AI5
F
594 619Right-handed alpha
Helix 78
AI6
F
637 647Right-handed alpha
Helix 79
AI7
F
650 664Right-handed alpha
Helix 80
AI8
F
667 681Right-handed alpha
Helix 81
AI9
F
682 708Right-handed alpha
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There are 6 sheets in PDB entry 9E2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 492first strand
Strand 2
A
495 496anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
491 492first strand
Strand 2
B
495 496anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
491 492first strand
Strand 2
C
495 496anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
491 492first strand
Strand 2
D
495 496anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
491 492first strand
Strand 2
E
495 496anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
491 492first strand
Strand 2
F
495 496anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il