Analysis of interatomic Contacts of Structural Units in PDB entry:
9E2J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E2J entry

There are 6 chains in PDB entry 9E2J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 27VAL 725
B
 PHE 27VAL 725
C
 ILE 28LYS 724
D
 PHE 27LYS 724
E
 ILE 28LYS 724
F
 LEU 426LYS 724
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are166 helices in PDB entry 9E2J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 75Right-handed alpha
Helix 2
AA2
A
92 96Right-handed 310
Helix 3
AA3
A
102 123Right-handed alpha
Helix 4
AA4
A
144 169Right-handed alpha
Helix 5
AA5
A
170 189Right-handed alpha
Helix 6
AA6
A
198 210Right-handed alpha
Helix 7
AA7
A
211 224Right-handed alpha
Helix 8
AA8
A
228 265Right-handed alpha
Helix 9
AA9
A
273 282Right-handed alpha
Helix 10
AB1
A
285 315Right-handed alpha
Helix 11
AB2
A
320 331Right-handed alpha
Helix 12
AB3
A
332 339Right-handed alpha
Helix 13
AB4
A
340 342Right-handed 310
Helix 14
AB5
A
350 361Right-handed alpha
Helix 15
AB6
A
432 438Right-handed alpha
Helix 16
AB7
A
445 456Right-handed alpha
Helix 17
AB8
A
463 488Right-handed alpha
Helix 18
AB9
A
497 502Right-handed alpha
Helix 19
AC1
A
503 525Right-handed alpha
Helix 20
AC2
A
527 555Right-handed alpha
Helix 21
AC3
A
559 569Right-handed alpha
Helix 22
AC4
A
571 585Right-handed alpha
Helix 23
AC5
A
593 617Right-handed alpha
Helix 24
AC6
A
637 647Right-handed alpha
Helix 25
AC7
A
650 664Right-handed alpha
Helix 26
AC8
A
667 680Right-handed alpha
Helix 27
AC9
A
683 710Right-handed alpha
Helix 28
AD1
A
713 723Right-handed alpha
Helix 29
AD2
B
63 76Right-handed alpha
Helix 30
AD3
B
93 98Right-handed alpha
Helix 31
AD4
B
102 124Right-handed alpha
Helix 32
AD5
B
148 169Right-handed alpha
Helix 33
AD6
B
169 188Right-handed alpha
Helix 34
AD7
B
203 210Right-handed alpha
Helix 35
AD8
B
211 224Right-handed alpha
Helix 36
AD9
B
228 235Right-handed alpha
Helix 37
AE1
B
239 254Right-handed alpha
Helix 38
AE2
B
254 265Right-handed alpha
Helix 39
AE3
B
291 313Right-handed alpha
Helix 40
AE4
B
314 319Right-handed alpha
Helix 41
AE5
B
319 331Right-handed alpha
Helix 42
AE6
B
332 340Right-handed alpha
Helix 43
AE7
B
347 350Right-handed 310
Helix 44
AE8
B
351 357Right-handed alpha
Helix 45
AE9
B
431 439Right-handed alpha
Helix 46
AF1
B
446 459Right-handed alpha
Helix 47
AF2
B
462 488Right-handed alpha
Helix 48
AF3
B
498 501Right-handed 310
Helix 49
AF4
B
503 522Right-handed alpha
Helix 50
AF5
B
529 554Right-handed alpha
Helix 51
AF6
B
559 569Right-handed alpha
Helix 52
AF7
B
572 586Right-handed alpha
Helix 53
AF8
B
587 591Right-handed 310
Helix 54
AF9
B
593 619Right-handed alpha
Helix 55
AG1
B
637 647Right-handed alpha
Helix 56
AG2
B
650 660Right-handed alpha
Helix 57
AG3
B
667 679Right-handed alpha
Helix 58
AG4
B
682 710Right-handed alpha
Helix 59
AG5
B
714 723Right-handed alpha
Helix 60
AG6
C
59 77Right-handed alpha
Helix 61
AG7
C
92 96Right-handed 310
Helix 62
AG8
C
102 124Right-handed alpha
Helix 63
AG9
C
146 169Right-handed alpha
Helix 64
AH1
C
170 188Right-handed alpha
Helix 65
AH2
C
198 210Right-handed alpha
Helix 66
AH3
C
211 221Right-handed alpha
Helix 67
AH4
C
228 263Right-handed alpha
Helix 68
AH5
C
273 282Right-handed alpha
Helix 69
AH6
C
286 314Right-handed alpha
Helix 70
AH7
C
320 331Right-handed alpha
Helix 71
AH8
C
331 341Right-handed alpha
Helix 72
AH9
C
347 349Right-handed 310
Helix 73
AI1
C
350 361Right-handed alpha
Helix 74
AI2
C
432 439Right-handed alpha
Helix 75
AI3
C
446 459Right-handed alpha
Helix 76
AI4
C
461 487Right-handed alpha
Helix 77
AI5
C
503 525Right-handed alpha
Helix 78
AI6
C
529 538Right-handed alpha
Helix 79
AI7
C
538 554Right-handed alpha
Helix 80
AI8
C
559 567Right-handed alpha
Helix 81
AI9
C
571 586Right-handed alpha
Helix 82
AJ1
C
593 616Right-handed alpha
Helix 83
AJ2
C
637 647Right-handed alpha
Helix 84
AJ3
C
652 657Right-handed alpha
Helix 85
AJ4
C
657 664Right-handed alpha
Helix 86
AJ5
C
669 681Right-handed alpha
Helix 87
AJ6
C
683 709Right-handed alpha
Helix 88
AJ7
C
714 724Right-handed alpha
Helix 89
AJ8
D
30 34Right-handed 310
Helix 90
AJ9
D
59 76Right-handed alpha
Helix 91
AK1
D
92 98Right-handed alpha
Helix 92
AK2
D
106 124Right-handed alpha
Helix 93
AK3
D
145 156Right-handed alpha
Helix 94
AK4
D
157 169Right-handed alpha
Helix 95
AK5
D
170 189Right-handed alpha
Helix 96
AK6
D
198 210Right-handed alpha
Helix 97
AK7
D
211 224Right-handed alpha
Helix 98
AK8
D
228 235Right-handed alpha
Helix 99
AK9
D
235 265Right-handed alpha
Helix 100
AL1
D
273 282Right-handed alpha
Helix 101
AL2
D
285 314Right-handed alpha
Helix 102
AL3
D
322 341Right-handed alpha
Helix 103
AL4
D
347 349Right-handed 310
Helix 104
AL5
D
350 364Right-handed alpha
Helix 105
AL6
D
431 441Right-handed alpha
Helix 106
AL7
D
445 456Right-handed alpha
Helix 107
AL8
D
461 486Right-handed alpha
Helix 108
AL9
D
497 502Right-handed alpha
Helix 109
AM1
D
503 522Right-handed alpha
Helix 110
AM2
D
523 526Right-handed 310
Helix 111
AM3
D
527 538Right-handed alpha
Helix 112
AM4
D
539 554Right-handed alpha
Helix 113
AM5
D
559 571Right-handed alpha
Helix 114
AM6
D
572 586Right-handed alpha
Helix 115
AM7
D
593 615Right-handed alpha
Helix 116
AM8
D
637 643Right-handed alpha
Helix 117
AM9
D
652 657Right-handed alpha
Helix 118
AN1
D
659 664Right-handed alpha
Helix 119
AN2
D
667 682Right-handed alpha
Helix 120
AN3
D
682 710Right-handed alpha
Helix 121
AN4
D
713 723Right-handed alpha
Helix 122
AN5
E
30 34Right-handed 310
Helix 123
AN6
E
59 62Right-handed 310
Helix 124
AN7
E
63 77Right-handed alpha
Helix 125
AN8
E
92 98Right-handed alpha
Helix 126
AN9
E
102 124Right-handed alpha
Helix 127
AO1
E
148 166Right-handed alpha
Helix 128
AO2
E
169 189Right-handed alpha
Helix 129
AO3
E
211 224Right-handed alpha
Helix 130
AO4
E
228 234Right-handed alpha
Helix 131
AO5
E
246 254Right-handed alpha
Helix 132
AO6
E
254 265Right-handed alpha
Helix 133
AO7
E
286 309Right-handed alpha
Helix 134
AO8
E
321 331Right-handed alpha
Helix 135
AO9
E
331 342Right-handed alpha
Helix 136
AP1
E
349 358Right-handed alpha
Helix 137
AP2
E
432 440Right-handed alpha
Helix 138
AP3
E
446 457Right-handed alpha
Helix 139
AP4
E
461 488Right-handed alpha
Helix 140
AP5
E
506 521Right-handed alpha
Helix 141
AP6
E
527 534Right-handed alpha
Helix 142
AP7
E
536 554Right-handed alpha
Helix 143
AP8
E
559 571Right-handed alpha
Helix 144
AP9
E
571 581Right-handed alpha
Helix 145
AQ1
E
587 591Right-handed 310
Helix 146
AQ2
E
594 619Right-handed alpha
Helix 147
AQ3
E
630 634Right-handed 310
Helix 148
AQ4
E
637 647Right-handed alpha
Helix 149
AQ5
E
652 659Right-handed alpha
Helix 150
AQ6
E
667 679Right-handed alpha
Helix 151
AQ7
E
682 710Right-handed alpha
Helix 152
AQ8
E
713 724Right-handed alpha
Helix 153
AQ9
F
431 439Right-handed alpha
Helix 154
AR1
F
446 454Right-handed alpha
Helix 155
AR2
F
462 486Right-handed alpha
Helix 156
AR3
F
506 524Right-handed alpha
Helix 157
AR4
F
525 527Right-handed 310
Helix 158
AR5
F
528 555Right-handed alpha
Helix 159
AR6
F
559 568Right-handed alpha
Helix 160
AR7
F
573 585Right-handed alpha
Helix 161
AR8
F
593 617Right-handed alpha
Helix 162
AR9
F
637 647Right-handed alpha
Helix 163
AS1
F
650 664Right-handed alpha
Helix 164
AS2
F
667 681Right-handed alpha
Helix 165
AS3
F
683 710Right-handed alpha
Helix 166
AS4
F
714 722Right-handed alpha
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There are 4 sheets in PDB entry 9E2J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
53 54anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
491 492first strand
Strand 2
B
495 496anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
491 492first strand
Strand 2
C
495 496anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
491 492first strand
Strand 2
E
495 496anti-parallel
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