Analysis of interatomic Contacts of Structural Units in PDB entry:
9E2K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E2K entry

There are 6 chains in PDB entry 9E2K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 426VAL 725
B
 ASP 26ILE 698
C
 ILE 425THR 709
D
 ILE 425SER 701
E
 LEU 426THR 709
F
 ILE 425GLY 710
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 9E2K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
433 439Right-handed alpha
Helix 2
AA2
A
445 459Right-handed alpha
Helix 3
AA3
A
461 486Right-handed alpha
Helix 4
AA4
A
498 501Right-handed 310
Helix 5
AA5
A
503 522Right-handed alpha
Helix 6
AA6
A
523 527Right-handed 310
Helix 7
AA7
A
528 555Right-handed alpha
Helix 8
AA8
A
559 571Right-handed alpha
Helix 9
AA9
A
572 586Right-handed alpha
Helix 10
AB1
A
594 619Right-handed alpha
Helix 11
AB2
A
637 647Right-handed alpha
Helix 12
AB3
A
652 662Right-handed alpha
Helix 13
AB4
A
667 678Right-handed alpha
Helix 14
AB5
A
682 708Right-handed alpha
Helix 15
AB6
A
713 724Right-handed alpha
Helix 16
AB7
B
43 47Right-handed 310
Helix 17
AB8
B
59 77Right-handed alpha
Helix 18
AB9
B
92 97Right-handed alpha
Helix 19
AC1
B
106 120Right-handed alpha
Helix 20
AC2
B
146 169Right-handed alpha
Helix 21
AC3
B
169 190Right-handed alpha
Helix 22
AC4
B
198 210Right-handed alpha
Helix 23
AC5
B
212 224Right-handed alpha
Helix 24
AC6
B
228 265Right-handed alpha
Helix 25
AC7
B
275 282Right-handed alpha
Helix 26
AC8
B
286 293Right-handed alpha
Helix 27
AC9
B
295 310Right-handed alpha
Helix 28
AD1
B
311 314Right-handed 310
Helix 29
AD2
B
319 328Right-handed alpha
Helix 30
AD3
B
329 331Right-handed 310
Helix 31
AD4
B
332 341Right-handed alpha
Helix 32
AD5
B
347 350Right-handed 310
Helix 33
AD6
B
351 358Right-handed alpha
Helix 34
AD7
B
433 441Right-handed alpha
Helix 35
AD8
B
445 451Right-handed alpha
Helix 36
AD9
B
461 486Right-handed alpha
Helix 37
AE1
B
498 501Right-handed 310
Helix 38
AE2
B
503 523Right-handed alpha
Helix 39
AE3
B
524 526Right-handed 310
Helix 40
AE4
B
527 529Right-handed 310
Helix 41
AE5
B
530 554Right-handed alpha
Helix 42
AE6
B
559 571Right-handed alpha
Helix 43
AE7
B
572 586Right-handed alpha
Helix 44
AE8
B
594 619Right-handed alpha
Helix 45
AE9
B
637 647Right-handed alpha
Helix 46
AF1
B
650 664Right-handed alpha
Helix 47
AF2
B
667 681Right-handed alpha
Helix 48
AF3
B
682 698Right-handed alpha
Helix 49
AF4
C
431 439Right-handed alpha
Helix 50
AF5
C
445 458Right-handed alpha
Helix 51
AF6
C
461 486Right-handed alpha
Helix 52
AF7
C
498 501Right-handed 310
Helix 53
AF8
C
503 523Right-handed alpha
Helix 54
AF9
C
524 526Right-handed 310
Helix 55
AG1
C
527 554Right-handed alpha
Helix 56
AG2
C
559 567Right-handed alpha
Helix 57
AG3
C
571 583Right-handed alpha
Helix 58
AG4
C
594 619Right-handed alpha
Helix 59
AG5
C
637 647Right-handed alpha
Helix 60
AG6
C
652 664Right-handed alpha
Helix 61
AG7
C
667 681Right-handed alpha
Helix 62
AG8
C
682 709Right-handed alpha
Helix 63
AG9
D
432 441Right-handed alpha
Helix 64
AH1
D
445 451Right-handed alpha
Helix 65
AH2
D
461 486Right-handed alpha
Helix 66
AH3
D
498 501Right-handed 310
Helix 67
AH4
D
503 524Right-handed alpha
Helix 68
AH5
D
527 555Right-handed alpha
Helix 69
AH6
D
559 567Right-handed alpha
Helix 70
AH7
D
572 585Right-handed alpha
Helix 71
AH8
D
593 615Right-handed alpha
Helix 72
AH9
D
637 647Right-handed alpha
Helix 73
AI1
D
650 662Right-handed alpha
Helix 74
AI2
D
667 682Right-handed alpha
Helix 75
AI3
D
683 701Right-handed alpha
Helix 76
AI4
E
432 441Right-handed alpha
Helix 77
AI5
E
445 459Right-handed alpha
Helix 78
AI6
E
461 486Right-handed alpha
Helix 79
AI7
E
498 503Right-handed alpha
Helix 80
AI8
E
503 523Right-handed alpha
Helix 81
AI9
E
524 527Right-handed 310
Helix 82
AJ1
E
528 555Right-handed alpha
Helix 83
AJ2
E
559 571Right-handed alpha
Helix 84
AJ3
E
572 586Right-handed alpha
Helix 85
AJ4
E
594 619Right-handed alpha
Helix 86
AJ5
E
637 647Right-handed alpha
Helix 87
AJ6
E
650 664Right-handed alpha
Helix 88
AJ7
E
667 682Right-handed alpha
Helix 89
AJ8
E
682 709Right-handed alpha
Helix 90
AJ9
F
432 441Right-handed alpha
Helix 91
AK1
F
445 459Right-handed alpha
Helix 92
AK2
F
461 486Right-handed alpha
Helix 93
AK3
F
498 501Right-handed 310
Helix 94
AK4
F
502 524Right-handed alpha
Helix 95
AK5
F
527 555Right-handed alpha
Helix 96
AK6
F
559 570Right-handed alpha
Helix 97
AK7
F
571 586Right-handed alpha
Helix 98
AK8
F
594 619Right-handed alpha
Helix 99
AK9
F
637 647Right-handed alpha
Helix 100
AL1
F
650 664Right-handed alpha
Helix 101
AL2
F
667 679Right-handed alpha
Helix 102
AL3
F
685 705Right-handed alpha
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There are 7 sheets in PDB entry 9E2K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 492first strand
Strand 2
A
495 496anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 36first strand
Strand 2
B
54 56anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
491 492first strand
Strand 2
B
495 496anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
491 492first strand
Strand 2
C
495 496anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
491 492first strand
Strand 2
D
495 496anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
491 492first strand
Strand 2
E
495 496anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
491 492first strand
Strand 2
F
495 496anti-parallel
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