Analysis of interatomic Contacts of Structural Units in PDB entry:
9E4Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9E4Z entry

There are 8 chains in PDB entry 9E4Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 10	ALA 820
B	ASN 10	ARG 819
C	ASN 10	ALA 820
D	ASN 10	ARG 819
E	LEU 1002	GLY 1209
F	LEU 1002	GLY 1209
G	LEU 1002	GLY 1209
H	LEU 1002	GLY 1209

There are152 helices in PDB entry 9E4Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	37	Right-handed alpha
Helix 2	AA2	A	54	68	Right-handed alpha
Helix 3	AA3	A	81	93	Right-handed alpha
Helix 4	AA4	A	117	128	Right-handed alpha
Helix 5	AA5	A	139	142	Right-handed 310
Helix 6	AA6	A	143	156	Right-handed alpha
Helix 7	AA7	A	169	173	Right-handed 310
Helix 8	AA8	A	174	187	Right-handed alpha
Helix 9	AA9	A	197	211	Right-handed alpha
Helix 10	AB1	A	226	230	Right-handed 310
Helix 11	AB2	A	234	238	Right-handed 310
Helix 12	AB3	A	252	263	Right-handed alpha
Helix 13	AB4	A	279	302	Right-handed alpha
Helix 14	AB5	A	323	336	Right-handed alpha
Helix 15	AB6	A	411	415	Right-handed 310
Helix 16	AB7	A	423	437	Right-handed alpha
Helix 17	AB8	A	463	468	Right-handed alpha
Helix 18	AB9	A	482	487	Right-handed alpha
Helix 19	AC1	A	515	519	Right-handed 310
Helix 20	AC2	A	522	545	Right-handed alpha
Helix 21	AC3	A	565	569	Right-handed 310
Helix 22	AC4	A	572	583	Right-handed alpha
Helix 23	AC5	A	595	624	Right-handed alpha
Helix 24	AC6	A	653	662	Right-handed alpha
Helix 25	AC7	A	664	677	Right-handed alpha
Helix 26	AC8	A	685	696	Right-handed alpha
Helix 27	AC9	A	706	714	Right-handed alpha
Helix 28	AD1	A	742	756	Right-handed alpha
Helix 29	AD2	A	757	768	Right-handed alpha
Helix 30	AD3	A	788	820	Right-handed alpha
Helix 31	AD4	B	22	37	Right-handed alpha
Helix 32	AD5	B	54	68	Right-handed alpha
Helix 33	AD6	B	81	93	Right-handed alpha
Helix 34	AD7	B	117	128	Right-handed alpha
Helix 35	AD8	B	139	142	Right-handed 310
Helix 36	AD9	B	143	156	Right-handed alpha
Helix 37	AE1	B	169	173	Right-handed 310
Helix 38	AE2	B	174	188	Right-handed alpha
Helix 39	AE3	B	197	211	Right-handed alpha
Helix 40	AE4	B	232	236	Right-handed 310
Helix 41	AE5	B	252	264	Right-handed alpha
Helix 42	AE6	B	279	302	Right-handed alpha
Helix 43	AE7	B	323	334	Right-handed alpha
Helix 44	AE8	B	385	389	Right-handed 310
Helix 45	AE9	B	411	415	Right-handed 310
Helix 46	AF1	B	423	437	Right-handed alpha
Helix 47	AF2	B	461	469	Right-handed alpha
Helix 48	AF3	B	482	487	Right-handed alpha
Helix 49	AF4	B	515	519	Right-handed 310
Helix 50	AF5	B	522	544	Right-handed alpha
Helix 51	AF6	B	572	585	Right-handed alpha
Helix 52	AF7	B	598	621	Right-handed alpha
Helix 53	AF8	B	622	625	Right-handed 310
Helix 54	AF9	B	637	642	Right-handed 310
Helix 55	AG1	B	653	662	Right-handed alpha
Helix 56	AG2	B	664	675	Right-handed alpha
Helix 57	AG3	B	685	696	Right-handed alpha
Helix 58	AG4	B	706	713	Right-handed alpha
Helix 59	AG5	B	742	756	Right-handed alpha
Helix 60	AG6	B	758	765	Right-handed alpha
Helix 61	AG7	B	773	779	Right-handed alpha
Helix 62	AG8	B	788	791	Right-handed 310
Helix 63	AG9	B	792	819	Right-handed alpha
Helix 64	AH1	C	22	37	Right-handed alpha
Helix 65	AH2	C	54	68	Right-handed alpha
Helix 66	AH3	C	81	93	Right-handed alpha
Helix 67	AH4	C	117	128	Right-handed alpha
Helix 68	AH5	C	139	142	Right-handed 310
Helix 69	AH6	C	143	156	Right-handed alpha
Helix 70	AH7	C	169	173	Right-handed 310
Helix 71	AH8	C	174	186	Right-handed alpha
Helix 72	AH9	C	197	211	Right-handed alpha
Helix 73	AI1	C	226	230	Right-handed 310
Helix 74	AI2	C	232	237	Right-handed alpha
Helix 75	AI3	C	252	264	Right-handed alpha
Helix 76	AI4	C	279	302	Right-handed alpha
Helix 77	AI5	C	323	336	Right-handed alpha
Helix 78	AI6	C	411	415	Right-handed 310
Helix 79	AI7	C	423	437	Right-handed alpha
Helix 80	AI8	C	461	468	Right-handed alpha
Helix 81	AI9	C	482	487	Right-handed alpha
Helix 82	AJ1	C	515	519	Right-handed 310
Helix 83	AJ2	C	522	543	Right-handed alpha
Helix 84	AJ3	C	565	569	Right-handed 310
Helix 85	AJ4	C	572	583	Right-handed alpha
Helix 86	AJ5	C	595	624	Right-handed alpha
Helix 87	AJ6	C	638	642	Right-handed 310
Helix 88	AJ7	C	653	662	Right-handed alpha
Helix 89	AJ8	C	664	677	Right-handed alpha
Helix 90	AJ9	C	685	696	Right-handed alpha
Helix 91	AK1	C	706	713	Right-handed alpha
Helix 92	AK2	C	742	756	Right-handed alpha
Helix 93	AK3	C	757	768	Right-handed alpha
Helix 94	AK4	C	788	818	Right-handed alpha
Helix 95	AK5	D	22	37	Right-handed alpha
Helix 96	AK6	D	54	68	Right-handed alpha
Helix 97	AK7	D	81	93	Right-handed alpha
Helix 98	AK8	D	117	128	Right-handed alpha
Helix 99	AK9	D	139	142	Right-handed 310
Helix 100	AL1	D	143	156	Right-handed alpha
Helix 101	AL2	D	169	173	Right-handed 310
Helix 102	AL3	D	174	188	Right-handed alpha
Helix 103	AL4	D	197	211	Right-handed alpha
Helix 104	AL5	D	232	236	Right-handed 310
Helix 105	AL6	D	252	264	Right-handed alpha
Helix 106	AL7	D	279	302	Right-handed alpha
Helix 107	AL8	D	324	336	Right-handed alpha
Helix 108	AL9	D	387	392	Right-handed alpha
Helix 109	AM1	D	411	415	Right-handed 310
Helix 110	AM2	D	423	437	Right-handed alpha
Helix 111	AM3	D	461	469	Right-handed alpha
Helix 112	AM4	D	482	487	Right-handed alpha
Helix 113	AM5	D	515	519	Right-handed 310
Helix 114	AM6	D	522	544	Right-handed alpha
Helix 115	AM7	D	572	585	Right-handed alpha
Helix 116	AM8	D	597	617	Right-handed alpha
Helix 117	AM9	D	618	624	Right-handed 310
Helix 118	AN1	D	637	641	Right-handed 310
Helix 119	AN2	D	653	662	Right-handed alpha
Helix 120	AN3	D	664	677	Right-handed alpha
Helix 121	AN4	D	685	696	Right-handed alpha
Helix 122	AN5	D	706	713	Right-handed alpha
Helix 123	AN6	D	742	755	Right-handed alpha
Helix 124	AN7	D	757	768	Right-handed alpha
Helix 125	AN8	D	774	779	Right-handed alpha
Helix 126	AN9	D	788	791	Right-handed 310
Helix 127	AO1	D	792	819	Right-handed alpha
Helix 128	AO2	E	1006	1029	Right-handed alpha
Helix 129	AO3	E	1092	1103	Right-handed alpha
Helix 130	AO4	E	1104	1121	Right-handed alpha
Helix 131	AO5	E	1122	1125	Right-handed 310
Helix 132	AO6	E	1132	1160	Right-handed alpha
Helix 133	AO7	E	1176	1209	Right-handed alpha
Helix 134	AO8	F	1004	1029	Right-handed alpha
Helix 135	AO9	F	1091	1103	Right-handed alpha
Helix 136	AP1	F	1104	1121	Right-handed alpha
Helix 137	AP2	F	1122	1125	Right-handed 310
Helix 138	AP3	F	1132	1160	Right-handed alpha
Helix 139	AP4	F	1176	1204	Right-handed alpha
Helix 140	AP5	F	1204	1209	Right-handed alpha
Helix 141	AP6	G	1006	1029	Right-handed alpha
Helix 142	AP7	G	1091	1102	Right-handed alpha
Helix 143	AP8	G	1104	1121	Right-handed alpha
Helix 144	AP9	G	1122	1125	Right-handed 310
Helix 145	AQ1	G	1132	1160	Right-handed alpha
Helix 146	AQ2	G	1176	1208	Right-handed alpha
Helix 147	AQ3	H	1007	1029	Right-handed alpha
Helix 148	AQ4	H	1084	1090	Right-handed 310
Helix 149	AQ5	H	1091	1103	Right-handed alpha
Helix 150	AQ6	H	1104	1121	Right-handed alpha
Helix 151	AQ7	H	1131	1159	Right-handed alpha
Helix 152	AQ8	H	1176	1209	Right-handed alpha

There are 36 sheets in PDB entry 9E4Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	49	first strand
Strand 2	A	11	18	parallel
Strand 3	A	72	75	parallel
Strand 4	A	96	98	parallel
Strand 5	A	110	112	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	164	first strand
Strand 2	A	132	137	parallel
Strand 3	A	191	195	parallel
Strand 4	A	219	222	parallel
Strand 5	A	241	246	parallel
Strand 6	A	358	364	anti-parallel
Strand 7	A	367	374	anti-parallel
Strand 8	A	381	382	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	338	340	first strand
Strand 2	A	343	347	anti-parallel
Strand 3	A	353	354	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	444	first strand
Strand 2	A	395	399	parallel
Strand 3	A	474	475	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	407	408	first strand
Strand 2	A	421	422	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	491	first strand
Strand 2	A	735	737	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	498	first strand
Strand 2	A	730	732	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	646	649	first strand
Strand 2	A	700	705	parallel
Strand 3	A	500	505	anti-parallel
Strand 4	A	720	723	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	45	first strand
Strand 2	B	11	18	parallel
Strand 3	B	48	49	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	45	first strand
Strand 2	B	11	18	parallel
Strand 3	B	72	75	parallel
Strand 4	B	95	98	parallel
Strand 5	B	110	112	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	164	first strand
Strand 2	B	132	137	parallel
Strand 3	B	191	195	parallel
Strand 4	B	219	222	parallel
Strand 5	B	241	246	parallel
Strand 6	B	358	364	anti-parallel
Strand 7	B	367	374	anti-parallel
Strand 8	B	381	382	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	343	344	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	444	first strand
Strand 2	B	395	399	parallel
Strand 3	B	474	475	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	408	first strand
Strand 2	B	421	422	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	491	first strand
Strand 2	B	735	737	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	497	first strand
Strand 2	B	731	732	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	646	648	first strand
Strand 2	B	700	705	parallel
Strand 3	B	500	505	anti-parallel
Strand 4	B	720	723	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	48	first strand
Strand 2	C	11	17	parallel
Strand 3	C	72	75	parallel
Strand 4	C	96	98	parallel
Strand 5	C	110	112	parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	164	first strand
Strand 2	C	132	137	parallel
Strand 3	C	191	195	parallel
Strand 4	C	219	222	parallel
Strand 5	C	241	246	parallel
Strand 6	C	358	364	anti-parallel
Strand 7	C	367	374	anti-parallel
Strand 8	C	381	382	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	338	340	first strand
Strand 2	C	343	347	anti-parallel
Strand 3	C	353	354	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	444	first strand
Strand 2	C	395	399	parallel
Strand 3	C	474	475	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	407	408	first strand
Strand 2	C	421	422	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	491	first strand
Strand 2	C	735	737	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	730	732	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	646	649	first strand
Strand 2	C	700	705	parallel
Strand 3	C	500	505	anti-parallel
Strand 4	C	720	723	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	48	first strand
Strand 2	D	11	17	parallel
Strand 3	D	72	74	parallel
Strand 4	D	96	98	parallel
Strand 5	D	110	112	parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	164	first strand
Strand 2	D	132	137	parallel
Strand 3	D	191	195	parallel
Strand 4	D	219	222	parallel
Strand 5	D	241	246	parallel
Strand 6	D	358	364	anti-parallel
Strand 7	D	367	374	anti-parallel
Strand 8	D	381	382	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	439	444	first strand
Strand 2	D	394	399	parallel
Strand 3	D	474	475	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	407	408	first strand
Strand 2	D	421	422	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	498	first strand
Strand 2	D	730	737	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	646	648	first strand
Strand 2	D	700	705	parallel
Strand 3	D	500	505	anti-parallel
Strand 4	D	720	723	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1056	1060	first strand
Strand 2	E	1033	1037	anti-parallel
Strand 3	E	1174	1175	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1064	1065	first strand
Strand 2	E	1077	1078	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1077	1078	first strand
Strand 2	F	1064	1068	anti-parallel
Strand 3	F	1056	1060	anti-parallel
Strand 4	F	1033	1037	anti-parallel
Strand 5	F	1174	1175	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1077	1078	first strand
Strand 2	G	1064	1068	anti-parallel
Strand 3	G	1056	1060	anti-parallel
Strand 4	G	1033	1037	anti-parallel
Strand 5	G	1174	1175	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1077	1078	first strand
Strand 2	H	1064	1070	anti-parallel
Strand 3	H	1056	1060	anti-parallel
Strand 4	H	1033	1034	anti-parallel
Strand 5	H	1174	1175	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9E4Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
9E4Z