Analysis of interatomic Contacts of Structural Units in PDB entry:
9E51


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E51 entry

There are 4 chains in PDB entry 9E51 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 5GLN 230
C
 GLU 3ASN 340
D
 ILE 9PHE 61
A
 MET 824PHE 1099
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9E51. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
5 32Right-handed alpha
Helix 2
AA2
B
45 52Right-handed alpha
Helix 3
AA3
B
87 92Right-handed 310
Helix 4
AA4
B
94 98Right-handed 310
Helix 5
AA5
B
117 130Right-handed alpha
Helix 6
AA6
B
145 156Right-handed alpha
Helix 7
AA7
B
157 161Right-handed 310
Helix 8
AA8
B
171 185Right-handed alpha
Helix 9
AA9
B
207 226Right-handed alpha
Helix 10
AB1
C
4 26Right-handed alpha
Helix 11
AB2
C
29 34Right-handed alpha
Helix 12
AB3
C
128 132Right-handed 310
Helix 13
AB4
D
10 23Right-handed alpha
Helix 14
AB5
D
29 44Right-handed alpha
Helix 15
AB6
D
55 59Right-handed 310
Helix 16
AB7
A
826 830Right-handed 310
Helix 17
AB8
A
842 872Right-handed alpha
Helix 18
AB9
A
873 876Right-handed 310
Helix 19
AC1
A
879 901Right-handed alpha
Helix 20
AC2
A
908 940Right-handed alpha
Helix 21
AC3
A
949 972Right-handed alpha
Helix 22
AC4
A
991 1020Right-handed alpha
Helix 23
AC5
A
1028 1048Right-handed alpha
Helix 24
AC6
A
1049 1052Right-handed 310
Helix 25
AC7
A
1053 1057Right-handed 310
Helix 26
AC8
A
1062 1075Right-handed alpha
Helix 27
AC9
A
1075 1085Right-handed alpha
Helix 28
AD1
A
1088 1098Right-handed alpha
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There are 8 sheets in PDB entry 9E51. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 75first strand
Strand 2
B
80 85anti-parallel
Strand 3
B
34 39parallel
Strand 4
B
105 111parallel
Strand 5
B
138 144parallel
Strand 6
B
195 199parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 51first strand
Strand 2
C
336 339anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
88 94anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 105first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
121 125anti-parallel
Strand 4
C
134 139anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 151first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
165 170anti-parallel
Strand 4
C
175 181anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 192first strand
Strand 2
C
198 203anti-parallel
Strand 3
C
207 212anti-parallel
Strand 4
C
218 223anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
250 254anti-parallel
Strand 4
C
259 264anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 278first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
294 298anti-parallel
Strand 4
C
303 308anti-parallel
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