Analysis of interatomic Contacts of Structural Units in PDB entry:
9E5G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9E5G entry

There are 6 chains in PDB entry 9E5G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 2	GLY 222
B	THR 2	GLY 222
C	THR 2	GLY 222
D	THR 2	GLY 222
E	THR 2	GLY 222
F	THR 2	ALA 223

There are 55 helices in PDB entry 9E5G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	20	Right-handed alpha
Helix 2	AA2	A	45	50	Right-handed 310
Helix 3	AA3	A	51	70	Right-handed alpha
Helix 4	AA4	A	85	97	Right-handed alpha
Helix 5	AA5	A	111	114	Right-handed 310
Helix 6	AA6	A	138	149	Right-handed alpha
Helix 7	AA7	A	166	174	Right-handed alpha
Helix 8	AA8	A	185	196	Right-handed alpha
Helix 9	AA9	A	199	212	Right-handed alpha
Helix 10	AB1	A	212	221	Right-handed alpha
Helix 11	AB2	B	5	20	Right-handed alpha
Helix 12	AB3	B	45	50	Right-handed 310
Helix 13	AB4	B	51	70	Right-handed alpha
Helix 14	AB5	B	85	96	Right-handed alpha
Helix 15	AB6	B	138	149	Right-handed alpha
Helix 16	AB7	B	166	175	Right-handed alpha
Helix 17	AB8	B	185	196	Right-handed alpha
Helix 18	AB9	B	199	212	Right-handed alpha
Helix 19	AC1	B	212	220	Right-handed alpha
Helix 20	AC2	C	5	20	Right-handed alpha
Helix 21	AC3	C	45	50	Right-handed 310
Helix 22	AC4	C	51	70	Right-handed alpha
Helix 23	AC5	C	85	97	Right-handed alpha
Helix 24	AC6	C	138	149	Right-handed alpha
Helix 25	AC7	C	166	175	Right-handed alpha
Helix 26	AC8	C	185	196	Right-handed alpha
Helix 27	AC9	C	199	212	Right-handed alpha
Helix 28	AD1	C	212	219	Right-handed alpha
Helix 29	AD2	D	5	20	Right-handed alpha
Helix 30	AD3	D	45	50	Right-handed 310
Helix 31	AD4	D	51	70	Right-handed alpha
Helix 32	AD5	D	85	97	Right-handed alpha
Helix 33	AD6	D	138	149	Right-handed alpha
Helix 34	AD7	D	166	174	Right-handed alpha
Helix 35	AD8	D	185	196	Right-handed alpha
Helix 36	AD9	D	199	212	Right-handed alpha
Helix 37	AE1	D	212	220	Right-handed alpha
Helix 38	AE2	E	5	20	Right-handed alpha
Helix 39	AE3	E	45	50	Right-handed 310
Helix 40	AE4	E	51	70	Right-handed alpha
Helix 41	AE5	E	85	97	Right-handed alpha
Helix 42	AE6	E	138	149	Right-handed alpha
Helix 43	AE7	E	166	175	Right-handed alpha
Helix 44	AE8	E	185	196	Right-handed alpha
Helix 45	AE9	E	199	212	Right-handed alpha
Helix 46	AF1	E	212	221	Right-handed alpha
Helix 47	AF2	F	5	20	Right-handed alpha
Helix 48	AF3	F	45	50	Right-handed 310
Helix 49	AF4	F	51	70	Right-handed alpha
Helix 50	AF5	F	85	97	Right-handed alpha
Helix 51	AF6	F	138	149	Right-handed alpha
Helix 52	AF7	F	169	174	Right-handed alpha
Helix 53	AF8	F	185	196	Right-handed alpha
Helix 54	AF9	F	199	212	Right-handed alpha
Helix 55	AG1	F	212	220	Right-handed alpha

There are 14 sheets in PDB entry 9E5G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	25	first strand
Strand 2	A	41	43	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	32	first strand
Strand 2	A	38	39	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	100	103	anti-parallel
Strand 3	A	77	80	parallel
Strand 4	A	125	133	parallel
Strand 5	A	152	161	parallel
Strand 6	A	178	184	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	25	first strand
Strand 2	B	41	43	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	117	first strand
Strand 2	B	100	103	anti-parallel
Strand 3	B	77	81	parallel
Strand 4	B	125	133	parallel
Strand 5	B	152	161	parallel
Strand 6	B	178	184	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	25	first strand
Strand 2	C	41	43	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	117	first strand
Strand 2	C	100	103	anti-parallel
Strand 3	C	77	80	parallel
Strand 4	C	125	133	parallel
Strand 5	C	152	161	parallel
Strand 6	C	178	184	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	23	25	first strand
Strand 2	D	41	43	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	116	117	first strand
Strand 2	D	100	103	anti-parallel
Strand 3	D	77	80	parallel
Strand 4	D	125	133	parallel
Strand 5	D	152	161	parallel
Strand 6	D	178	184	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	25	first strand
Strand 2	E	41	43	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	116	117	first strand
Strand 2	E	100	103	anti-parallel
Strand 3	E	77	80	parallel
Strand 4	E	125	133	parallel
Strand 5	E	152	161	parallel
Strand 6	E	178	184	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	23	25	first strand
Strand 2	F	41	43	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	32	first strand
Strand 2	F	38	39	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	116	117	first strand
Strand 2	F	100	103	anti-parallel
Strand 3	F	77	81	parallel
Strand 4	F	125	133	parallel
Strand 5	F	152	161	parallel
Strand 6	F	178	184	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9E5G

Analysis of interatomic Contacts of Structural Units in PDB entry:
9E5G