Analysis of interatomic Contacts of Structural Units in PDB entry:
9E5N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9E5N entry

There are 3 chains in PDB entry 9E5N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 91	LYS 865
B	ALA 91	LYS 865
C	ALA 91	LYS 865

There are 48 helices in PDB entry 9E5N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	91	106	Right-handed alpha
Helix 2	AA2	A	193	201	Right-handed alpha
Helix 3	AA3	A	225	227	Right-handed 310
Helix 4	AA4	A	306	310	Right-handed 310
Helix 5	AA5	A	412	429	Right-handed alpha
Helix 6	AA6	A	458	468	Right-handed alpha
Helix 7	AA7	A	510	546	Right-handed alpha
Helix 8	AA8	A	546	556	Right-handed alpha
Helix 9	AA9	A	577	579	Right-handed 310
Helix 10	AB1	A	686	691	Right-handed alpha
Helix 11	AB2	A	701	724	Right-handed alpha
Helix 12	AB3	A	728	739	Right-handed alpha
Helix 13	AB4	A	747	772	Right-handed alpha
Helix 14	AB5	A	773	803	Right-handed alpha
Helix 15	AB6	A	804	810	Right-handed alpha
Helix 16	AB7	A	836	865	Right-handed alpha
Helix 17	AB8	B	92	106	Right-handed alpha
Helix 18	AB9	B	193	201	Right-handed alpha
Helix 19	AC1	B	225	227	Right-handed 310
Helix 20	AC2	B	306	310	Right-handed 310
Helix 21	AC3	B	412	429	Right-handed alpha
Helix 22	AC4	B	458	468	Right-handed alpha
Helix 23	AC5	B	510	546	Right-handed alpha
Helix 24	AC6	B	546	556	Right-handed alpha
Helix 25	AC7	B	577	579	Right-handed 310
Helix 26	AC8	B	686	691	Right-handed alpha
Helix 27	AC9	B	701	724	Right-handed alpha
Helix 28	AD1	B	728	739	Right-handed alpha
Helix 29	AD2	B	747	772	Right-handed alpha
Helix 30	AD3	B	773	803	Right-handed alpha
Helix 31	AD4	B	804	810	Right-handed alpha
Helix 32	AD5	B	836	865	Right-handed alpha
Helix 33	AD6	C	92	106	Right-handed alpha
Helix 34	AD7	C	193	201	Right-handed alpha
Helix 35	AD8	C	225	227	Right-handed 310
Helix 36	AD9	C	306	310	Right-handed 310
Helix 37	AE1	C	412	429	Right-handed alpha
Helix 38	AE2	C	458	468	Right-handed alpha
Helix 39	AE3	C	510	546	Right-handed alpha
Helix 40	AE4	C	546	556	Right-handed alpha
Helix 41	AE5	C	577	579	Right-handed 310
Helix 42	AE6	C	686	691	Right-handed alpha
Helix 43	AE7	C	701	725	Right-handed alpha
Helix 44	AE8	C	728	739	Right-handed alpha
Helix 45	AE9	C	747	772	Right-handed alpha
Helix 46	AF1	C	773	803	Right-handed alpha
Helix 47	AF2	C	804	810	Right-handed alpha
Helix 48	AF3	C	836	865	Right-handed alpha

There are 24 sheets in PDB entry 9E5N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	576	first strand
Strand 2	A	113	115	anti-parallel
Strand 3	A	622	624	parallel
Strand 4	A	613	617	anti-parallel
Strand 5	A	601	604	anti-parallel
Strand 6	A	581	583	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	559	563	first strand
Strand 2	A	568	572	anti-parallel
Strand 3	A	124	127	anti-parallel
Strand 4	B	665	667	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	435	first strand
Strand 2	A	448	457	anti-parallel
Strand 3	A	440	444	anti-parallel
Strand 4	A	395	398	anti-parallel
Strand 5	A	383	388	anti-parallel
Strand 6	A	366	379	anti-parallel
Strand 7	A	140	152	anti-parallel
Strand 8	A	448	457	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	191	first strand
Strand 2	A	157	170	anti-parallel
Strand 3	A	267	280	anti-parallel
Strand 4	A	287	289	anti-parallel
Strand 5	A	294	295	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	236	first strand
Strand 2	A	246	248	anti-parallel
Strand 3	A	267	280	anti-parallel
Strand 4	A	157	170	anti-parallel
Strand 5	A	351	355	anti-parallel
Strand 6	A	342	346	anti-parallel
Strand 7	A	319	322	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	213	first strand
Strand 2	A	220	223	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	595	597	first strand
Strand 2	A	630	632	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	638	643	first strand
Strand 2	A	646	651	anti-parallel
Strand 3	A	654	659	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	665	667	first strand
Strand 2	C	124	127	parallel
Strand 3	C	568	572	anti-parallel
Strand 4	C	559	563	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	574	576	first strand
Strand 2	B	113	115	anti-parallel
Strand 3	B	622	624	parallel
Strand 4	B	613	617	anti-parallel
Strand 5	B	601	604	anti-parallel
Strand 6	B	581	583	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	559	563	first strand
Strand 2	B	568	572	anti-parallel
Strand 3	B	124	127	anti-parallel
Strand 4	C	665	667	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	435	first strand
Strand 2	B	448	457	anti-parallel
Strand 3	B	440	444	anti-parallel
Strand 4	B	395	398	anti-parallel
Strand 5	B	383	388	anti-parallel
Strand 6	B	366	379	anti-parallel
Strand 7	B	140	152	anti-parallel
Strand 8	B	448	457	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	191	first strand
Strand 2	B	157	170	anti-parallel
Strand 3	B	267	280	anti-parallel
Strand 4	B	287	289	anti-parallel
Strand 5	B	294	295	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	236	first strand
Strand 2	B	246	248	anti-parallel
Strand 3	B	267	280	anti-parallel
Strand 4	B	157	170	anti-parallel
Strand 5	B	351	355	anti-parallel
Strand 6	B	342	346	anti-parallel
Strand 7	B	319	322	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	213	first strand
Strand 2	B	220	223	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	595	597	first strand
Strand 2	B	630	632	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	638	643	first strand
Strand 2	B	646	651	anti-parallel
Strand 3	B	654	659	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	574	576	first strand
Strand 2	C	113	115	anti-parallel
Strand 3	C	622	624	parallel
Strand 4	C	613	617	anti-parallel
Strand 5	C	601	604	anti-parallel
Strand 6	C	581	583	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	435	first strand
Strand 2	C	448	457	anti-parallel
Strand 3	C	440	444	anti-parallel
Strand 4	C	395	398	anti-parallel
Strand 5	C	383	388	anti-parallel
Strand 6	C	366	379	anti-parallel
Strand 7	C	140	152	anti-parallel
Strand 8	C	448	457	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	191	first strand
Strand 2	C	157	170	anti-parallel
Strand 3	C	267	280	anti-parallel
Strand 4	C	287	289	anti-parallel
Strand 5	C	294	295	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	236	first strand
Strand 2	C	246	248	anti-parallel
Strand 3	C	267	280	anti-parallel
Strand 4	C	157	170	anti-parallel
Strand 5	C	351	355	anti-parallel
Strand 6	C	342	346	anti-parallel
Strand 7	C	319	322	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	213	first strand
Strand 2	C	220	223	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	595	597	first strand
Strand 2	C	630	632	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	638	643	first strand
Strand 2	C	646	651	anti-parallel
Strand 3	C	654	659	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9E5N

Analysis of interatomic Contacts of Structural Units in PDB entry:
9E5N