Analysis of interatomic Contacts of Structural Units in PDB entry:
9E5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E5W entry

There are 2 chains in PDB entry 9E5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14ALA 1231
B
 ALA 14ARG 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are121 helices in PDB entry 9E5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 38Right-handed alpha
Helix 2
AA2
A
42 54Right-handed alpha
Helix 3
AA3
A
57 77Right-handed alpha
Helix 4
AA4
A
84 91Right-handed alpha
Helix 5
AA5
A
94 110Right-handed alpha
Helix 6
AA6
A
113 124Right-handed alpha
Helix 7
AA7
A
143 153Right-handed alpha
Helix 8
AA8
A
160 194Right-handed alpha
Helix 9
AA9
A
200 213Right-handed alpha
Helix 10
AB1
A
229 252Right-handed alpha
Helix 11
AB2
A
254 259Right-handed alpha
Helix 12
AB3
A
265 269Right-handed 310
Helix 13
AB4
A
274 276Right-handed 310
Helix 14
AB5
A
277 300Right-handed alpha
Helix 15
AB6
A
309 311Right-handed 310
Helix 16
AB7
A
312 326Right-handed alpha
Helix 17
AB8
A
327 330Right-handed 310
Helix 18
AB9
A
345 361Right-handed alpha
Helix 19
AC1
A
373 384Right-handed alpha
Helix 20
AC2
A
394 411Right-handed alpha
Helix 21
AC3
A
424 436Right-handed alpha
Helix 22
AC4
A
453 458Right-handed alpha
Helix 23
AC5
A
478 483Right-handed alpha
Helix 24
AC6
A
486 493Right-handed alpha
Helix 25
AC7
A
498 505Right-handed alpha
Helix 26
AC8
A
509 514Right-handed alpha
Helix 27
AC9
A
516 523Right-handed alpha
Helix 28
AD1
A
536 540Right-handed 310
Helix 29
AD2
A
555 571Right-handed alpha
Helix 30
AD3
A
609 629Right-handed alpha
Helix 31
AD4
A
631 649Right-handed alpha
Helix 32
AD5
A
649 662Right-handed alpha
Helix 33
AD6
A
664 690Right-handed alpha
Helix 34
AD7
A
710 723Right-handed alpha
Helix 35
AD8
A
735 749Right-handed alpha
Helix 36
AD9
A
762 772Right-handed alpha
Helix 37
AE1
A
783 796Right-handed alpha
Helix 38
AE2
A
824 838Right-handed alpha
Helix 39
AE3
A
839 842Right-handed 310
Helix 40
AE4
A
854 869Right-handed alpha
Helix 41
AE5
A
888 905Right-handed alpha
Helix 42
AE6
A
915 921Right-handed 310
Helix 43
AE7
A
933 937Right-handed 310
Helix 44
AE8
A
952 954Right-handed 310
Helix 45
AE9
A
955 966Right-handed alpha
Helix 46
AF1
A
978 989Right-handed alpha
Helix 47
AF2
A
1013 1017Right-handed 310
Helix 48
AF3
A
1027 1032Right-handed 310
Helix 49
AF4
A
1047 1061Right-handed alpha
Helix 50
AF5
A
1062 1076Right-handed alpha
Helix 51
AF6
A
1108 1122Right-handed alpha
Helix 52
AF7
A
1131 1133Right-handed 310
Helix 53
AF8
A
1134 1139Right-handed 310
Helix 54
AF9
A
1142 1147Right-handed alpha
Helix 55
AG1
A
1154 1158Right-handed 310
Helix 56
AG2
A
1169 1182Right-handed alpha
Helix 57
AG3
A
1194 1201Right-handed alpha
Helix 58
AG4
A
1206 1209Right-handed 310
Helix 59
AG5
A
1226 1231Right-handed alpha
Helix 60
AG6
B
29 38Right-handed alpha
Helix 61
AG7
B
42 55Right-handed alpha
Helix 62
AG8
B
57 77Right-handed alpha
Helix 63
AG9
B
84 91Right-handed alpha
Helix 64
AH1
B
94 110Right-handed alpha
Helix 65
AH2
B
113 124Right-handed alpha
Helix 66
AH3
B
129 134Right-handed alpha
Helix 67
AH4
B
135 141Right-handed alpha
Helix 68
AH5
B
143 153Right-handed alpha
Helix 69
AH6
B
160 194Right-handed alpha
Helix 70
AH7
B
200 215Right-handed alpha
Helix 71
AH8
B
229 252Right-handed alpha
Helix 72
AH9
B
254 259Right-handed alpha
Helix 73
AI1
B
265 269Right-handed 310
Helix 74
AI2
B
274 276Right-handed 310
Helix 75
AI3
B
277 300Right-handed alpha
Helix 76
AI4
B
309 311Right-handed 310
Helix 77
AI5
B
312 325Right-handed alpha
Helix 78
AI6
B
326 330Right-handed 310
Helix 79
AI7
B
345 361Right-handed alpha
Helix 80
AI8
B
373 384Right-handed alpha
Helix 81
AI9
B
394 411Right-handed alpha
Helix 82
AJ1
B
424 435Right-handed alpha
Helix 83
AJ2
B
453 458Right-handed alpha
Helix 84
AJ3
B
478 483Right-handed alpha
Helix 85
AJ4
B
485 495Right-handed alpha
Helix 86
AJ5
B
498 503Right-handed alpha
Helix 87
AJ6
B
509 514Right-handed alpha
Helix 88
AJ7
B
516 523Right-handed alpha
Helix 89
AJ8
B
536 540Right-handed 310
Helix 90
AJ9
B
541 545Right-handed 310
Helix 91
AK1
B
555 571Right-handed alpha
Helix 92
AK2
B
609 629Right-handed alpha
Helix 93
AK3
B
631 649Right-handed alpha
Helix 94
AK4
B
649 662Right-handed alpha
Helix 95
AK5
B
664 690Right-handed alpha
Helix 96
AK6
B
710 723Right-handed alpha
Helix 97
AK7
B
735 749Right-handed alpha
Helix 98
AK8
B
752 754Right-handed 310
Helix 99
AK9
B
762 772Right-handed alpha
Helix 100
AL1
B
783 796Right-handed alpha
Helix 101
AL2
B
824 838Right-handed alpha
Helix 102
AL3
B
839 842Right-handed 310
Helix 103
AL4
B
854 869Right-handed alpha
Helix 104
AL5
B
888 905Right-handed alpha
Helix 105
AL6
B
915 921Right-handed 310
Helix 106
AL7
B
933 937Right-handed 310
Helix 107
AL8
B
952 954Right-handed 310
Helix 108
AL9
B
955 965Right-handed alpha
Helix 109
AM1
B
978 989Right-handed alpha
Helix 110
AM2
B
1013 1017Right-handed 310
Helix 111
AM3
B
1027 1032Right-handed 310
Helix 112
AM4
B
1047 1060Right-handed alpha
Helix 113
AM5
B
1062 1076Right-handed alpha
Helix 114
AM6
B
1108 1122Right-handed alpha
Helix 115
AM7
B
1131 1133Right-handed 310
Helix 116
AM8
B
1134 1139Right-handed 310
Helix 117
AM9
B
1142 1147Right-handed alpha
Helix 118
AN1
B
1154 1159Right-handed alpha
Helix 119
AN2
B
1169 1182Right-handed alpha
Helix 120
AN3
B
1194 1201Right-handed alpha
Helix 121
AN4
B
1206 1209Right-handed 310
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There are 12 sheets in PDB entry 9E5W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 222first strand
Strand 2
A
261 264parallel
Strand 3
A
302 305parallel
Strand 4
A
335 340parallel
Strand 5
A
364 369parallel
Strand 6
A
416 421parallel
Strand 7
A
445 449parallel
Strand 8
A
470 476parallel
Strand 9
A
216 222parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 576first strand
Strand 2
A
597 607parallel
Strand 3
A
588 594anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
579 580first strand
Strand 2
A
583 584anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
756 758first strand
Strand 2
A
727 730parallel
Strand 3
A
700 703parallel
Strand 4
A
777 781parallel
Strand 5
A
807 810parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
909 911first strand
Strand 2
A
927 930anti-parallel
Strand 3
A
945 951parallel
Strand 4
A
847 853parallel
Strand 5
A
815 819parallel
Strand 6
A
971 975parallel
Strand 7
A
993 996parallel
Strand 8
A
1211 1219parallel
Strand 9
A
1090 1098anti-parallel
Strand 10
A
1081 1084anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1149 1152first strand
Strand 2
A
1125 1129parallel
Strand 3
A
1101 1105parallel
Strand 4
A
1163 1167parallel
Strand 5
A
1190 1193parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 222first strand
Strand 2
B
261 264parallel
Strand 3
B
303 305parallel
Strand 4
B
335 340parallel
Strand 5
B
364 369parallel
Strand 6
B
416 421parallel
Strand 7
B
445 449parallel
Strand 8
B
470 476parallel
Strand 9
B
217 222parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
574 576first strand
Strand 2
B
597 607parallel
Strand 3
B
588 594anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
579 580first strand
Strand 2
B
583 584anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
756 758first strand
Strand 2
B
727 730parallel
Strand 3
B
700 703parallel
Strand 4
B
777 781parallel
Strand 5
B
807 810parallel
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There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
909 911first strand
Strand 2
B
927 930anti-parallel
Strand 3
B
945 951parallel
Strand 4
B
847 853parallel
Strand 5
B
815 819parallel
Strand 6
B
971 975parallel
Strand 7
B
993 996parallel
Strand 8
B
1211 1219parallel
Strand 9
B
1090 1098anti-parallel
Strand 10
B
1081 1084anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1149 1152first strand
Strand 2
B
1125 1129parallel
Strand 3
B
1101 1105parallel
Strand 4
B
1164 1167parallel
Strand 5
B
1190 1193parallel
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