Analysis of interatomic Contacts of Structural Units in PDB entry:
9E6H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9E6H entry

There are 4 chains in PDB entry 9E6H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 30	ASP 273
B	SER 30	ALA 275
C	SER 30	ASP 273
D	SER 30	ASP 273

There are 8 helices in PDB entry 9E6H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	231	236	Right-handed alpha
Helix 2	AA2	A	250	254	Right-handed 310
Helix 3	AA3	B	231	236	Right-handed alpha
Helix 4	AA4	B	250	254	Right-handed 310
Helix 5	AA5	C	231	236	Right-handed alpha
Helix 6	AA6	C	250	254	Right-handed 310
Helix 7	AA7	D	231	236	Right-handed alpha
Helix 8	AA8	D	250	254	Right-handed 310

There are 16 sheets in PDB entry 9E6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	61	62	anti-parallel
Strand 3	A	256	267	anti-parallel
Strand 4	A	32	37	anti-parallel
Strand 5	D	32	37	anti-parallel
Strand 6	D	256	267	anti-parallel
Strand 7	D	61	62	anti-parallel
Strand 8	D	54	55	anti-parallel

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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	229	first strand
Strand 2	A	210	217	anti-parallel
Strand 3	A	196	205	anti-parallel
Strand 4	A	97	107	anti-parallel
Strand 5	A	256	267	anti-parallel
Strand 6	A	32	37	anti-parallel
Strand 7	D	32	37	anti-parallel
Strand 8	D	256	267	anti-parallel
Strand 9	D	97	107	anti-parallel
Strand 10	D	196	205	anti-parallel
Strand 11	D	210	217	anti-parallel
Strand 12	D	222	229	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	51	first strand
Strand 2	A	76	81	anti-parallel
Strand 3	A	239	247	anti-parallel
Strand 4	A	85	86	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	51	first strand
Strand 2	A	76	81	anti-parallel
Strand 3	A	239	247	anti-parallel
Strand 4	A	117	123	anti-parallel
Strand 5	A	153	158	anti-parallel
Strand 6	A	174	179	anti-parallel
Strand 7	A	186	189	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	70	71	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	61	62	anti-parallel
Strand 3	B	256	267	anti-parallel
Strand 4	B	32	37	anti-parallel
Strand 5	C	32	37	anti-parallel
Strand 6	C	256	267	anti-parallel
Strand 7	C	61	62	anti-parallel
Strand 8	C	54	55	anti-parallel

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There are 12 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	229	first strand
Strand 2	B	210	217	anti-parallel
Strand 3	B	196	205	anti-parallel
Strand 4	B	97	107	anti-parallel
Strand 5	B	256	267	anti-parallel
Strand 6	B	32	37	anti-parallel
Strand 7	C	32	37	anti-parallel
Strand 8	C	256	267	anti-parallel
Strand 9	C	97	107	anti-parallel
Strand 10	C	196	205	anti-parallel
Strand 11	C	210	217	anti-parallel
Strand 12	C	222	229	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	76	81	anti-parallel
Strand 3	B	239	247	anti-parallel
Strand 4	B	85	86	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	76	81	anti-parallel
Strand 3	B	239	247	anti-parallel
Strand 4	B	117	123	anti-parallel
Strand 5	B	153	158	anti-parallel
Strand 6	B	174	179	anti-parallel
Strand 7	B	186	189	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	70	71	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	51	first strand
Strand 2	C	76	81	anti-parallel
Strand 3	C	239	247	anti-parallel
Strand 4	C	85	86	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	51	first strand
Strand 2	C	76	81	anti-parallel
Strand 3	C	239	247	anti-parallel
Strand 4	C	117	123	anti-parallel
Strand 5	C	153	158	anti-parallel
Strand 6	C	174	179	anti-parallel
Strand 7	C	186	189	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	67	first strand
Strand 2	C	70	71	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	51	first strand
Strand 2	D	76	81	anti-parallel
Strand 3	D	239	247	anti-parallel
Strand 4	D	85	86	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	51	first strand
Strand 2	D	76	81	anti-parallel
Strand 3	D	239	247	anti-parallel
Strand 4	D	117	123	anti-parallel
Strand 5	D	153	158	anti-parallel
Strand 6	D	174	179	anti-parallel
Strand 7	D	186	189	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	67	first strand
Strand 2	D	70	71	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9E6H

Analysis of interatomic Contacts of Structural Units in PDB entry:
9E6H