Analysis of interatomic Contacts of Structural Units in PDB entry:
9E70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E70 entry

There are 2 chains in PDB entry 9E70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ILE 641
B
 GLY 2ILE 641
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 9E70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 14Right-handed alpha
Helix 2
AA2
A
24 26Right-handed 310
Helix 3
AA3
A
36 45Right-handed alpha
Helix 4
AA4
A
56 76Right-handed alpha
Helix 5
AA5
A
90 92Right-handed 310
Helix 6
AA6
A
93 118Right-handed alpha
Helix 7
AA7
A
129 133Right-handed 310
Helix 8
AA8
A
137 158Right-handed alpha
Helix 9
AA9
A
159 162Right-handed 310
Helix 10
AB1
A
176 190Right-handed alpha
Helix 11
AB2
A
206 216Right-handed alpha
Helix 12
AB3
A
251 262Right-handed alpha
Helix 13
AB4
A
264 269Right-handed alpha
Helix 14
AB5
A
274 287Right-handed alpha
Helix 15
AB6
A
288 290Right-handed 310
Helix 16
AB7
A
305 318Right-handed alpha
Helix 17
AB8
A
319 321Right-handed 310
Helix 18
AB9
A
332 344Right-handed alpha
Helix 19
AC1
A
344 354Right-handed alpha
Helix 20
AC2
A
425 442Right-handed alpha
Helix 21
AC3
A
448 473Right-handed alpha
Helix 22
AC4
A
488 492Right-handed 310
Helix 23
AC5
A
509 518Right-handed alpha
Helix 24
AC6
A
519 526Right-handed 310
Helix 25
AC7
A
527 536Right-handed alpha
Helix 26
AC8
A
541 545Right-handed 310
Helix 27
AC9
A
570 580Right-handed alpha
Helix 28
AD1
A
581 585Right-handed 310
Helix 29
AD2
A
586 593Right-handed alpha
Helix 30
AD3
B
4 14Right-handed alpha
Helix 31
AD4
B
24 26Right-handed 310
Helix 32
AD5
B
36 45Right-handed alpha
Helix 33
AD6
B
56 76Right-handed alpha
Helix 34
AD7
B
90 118Right-handed alpha
Helix 35
AD8
B
129 133Right-handed 310
Helix 36
AD9
B
137 158Right-handed alpha
Helix 37
AE1
B
159 162Right-handed 310
Helix 38
AE2
B
176 191Right-handed alpha
Helix 39
AE3
B
206 216Right-handed alpha
Helix 40
AE4
B
251 263Right-handed alpha
Helix 41
AE5
B
264 268Right-handed 310
Helix 42
AE6
B
274 290Right-handed alpha
Helix 43
AE7
B
297 301Right-handed 310
Helix 44
AE8
B
303 305Right-handed 310
Helix 45
AE9
B
306 322Right-handed alpha
Helix 46
AF1
B
332 344Right-handed alpha
Helix 47
AF2
B
345 359Right-handed alpha
Helix 48
AF3
B
426 439Right-handed alpha
Helix 49
AF4
B
449 472Right-handed alpha
Helix 50
AF5
B
488 492Right-handed 310
Helix 51
AF6
B
509 518Right-handed alpha
Helix 52
AF7
B
519 526Right-handed 310
Helix 53
AF8
B
527 536Right-handed alpha
Helix 54
AF9
B
541 545Right-handed 310
Helix 55
AG1
B
570 580Right-handed alpha
Helix 56
AG2
B
581 585Right-handed 310
Helix 57
AG3
B
586 593Right-handed alpha
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There are 7 sheets in PDB entry 9E70. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 22first strand
Strand 2
A
245 250anti-parallel
Strand 3
A
221 226anti-parallel
Strand 4
A
200 203parallel
Strand 5
A
31 35parallel
Strand 6
A
80 84parallel
Strand 7
A
165 169parallel
Strand 8
A
599 603anti-parallel
Strand 9
A
627 631anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 327first strand
Strand 2
A
330 331anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 552first strand
Strand 2
A
563 565anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
A
622 625anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 22first strand
Strand 2
B
245 250anti-parallel
Strand 3
B
220 226anti-parallel
Strand 4
B
199 203parallel
Strand 5
B
31 35parallel
Strand 6
B
80 84parallel
Strand 7
B
165 169parallel
Strand 8
B
598 603anti-parallel
Strand 9
B
627 632anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
326 327first strand
Strand 2
B
330 331anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
550 551first strand
Strand 2
B
564 565anti-parallel
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