Analysis of interatomic Contacts of Structural Units in PDB entry:
9E7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E7H entry

There are 4 chains in PDB entry 9E7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 22ARG 423
B
 MET 1ARG 419
C
 ARG 22ARG 423
D
 LEU 3GLU 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 9E7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 32Right-handed 310
Helix 2
AA2
A
33 41Right-handed alpha
Helix 3
AA3
A
51 63Right-handed alpha
Helix 4
AA4
A
64 68Right-handed 310
Helix 5
AA5
A
78 83Right-handed alpha
Helix 6
AA6
A
85 103Right-handed alpha
Helix 7
AA7
A
114 120Right-handed alpha
Helix 8
AA8
A
123 136Right-handed alpha
Helix 9
AA9
A
137 139Right-handed 310
Helix 10
AB1
A
154 165Right-handed alpha
Helix 11
AB2
A
183 198Right-handed alpha
Helix 12
AB3
A
231 239Right-handed alpha
Helix 13
AB4
A
251 267Right-handed alpha
Helix 14
AB5
A
269 276Right-handed alpha
Helix 15
AB6
A
280 289Right-handed alpha
Helix 16
AB7
A
308 319Right-handed alpha
Helix 17
AB8
A
337 343Right-handed alpha
Helix 18
AB9
A
355 367Right-handed alpha
Helix 19
AC1
A
377 384Right-handed alpha
Helix 20
AC2
A
390 397Right-handed alpha
Helix 21
AC3
A
405 423Right-handed alpha
Helix 22
AC4
B
11 21Right-handed alpha
Helix 23
AC5
B
37 46Right-handed alpha
Helix 24
AC6
B
67 84Right-handed alpha
Helix 25
AC7
B
94 101Right-handed alpha
Helix 26
AC8
B
103 112Right-handed alpha
Helix 27
AC9
B
128 144Right-handed alpha
Helix 28
AD1
B
168 183Right-handed alpha
Helix 29
AD2
B
195 202Right-handed alpha
Helix 30
AD3
B
212 227Right-handed alpha
Helix 31
AD4
B
238 254Right-handed alpha
Helix 32
AD5
B
265 271Right-handed alpha
Helix 33
AD6
B
273 277Right-handed 310
Helix 34
AD7
B
288 302Right-handed alpha
Helix 35
AD8
B
317 328Right-handed alpha
Helix 36
AD9
B
337 348Right-handed alpha
Helix 37
AE1
B
356 367Right-handed alpha
Helix 38
AE2
B
391 418Right-handed alpha
Helix 39
AE3
C
29 32Right-handed 310
Helix 40
AE4
C
33 41Right-handed alpha
Helix 41
AE5
C
51 63Right-handed alpha
Helix 42
AE6
C
64 68Right-handed 310
Helix 43
AE7
C
86 103Right-handed alpha
Helix 44
AE8
C
114 120Right-handed alpha
Helix 45
AE9
C
123 132Right-handed alpha
Helix 46
AF1
C
154 165Right-handed alpha
Helix 47
AF2
C
183 198Right-handed alpha
Helix 48
AF3
C
229 240Right-handed alpha
Helix 49
AF4
C
252 267Right-handed alpha
Helix 50
AF5
C
269 292Right-handed alpha
Helix 51
AF6
C
308 316Right-handed alpha
Helix 52
AF7
C
338 343Right-handed alpha
Helix 53
AF8
C
355 367Right-handed alpha
Helix 54
AF9
C
379 384Right-handed alpha
Helix 55
AG1
C
390 396Right-handed alpha
Helix 56
AG2
C
401 407Right-handed alpha
Helix 57
AG3
C
407 420Right-handed alpha
Helix 58
AG4
D
13 22Right-handed alpha
Helix 59
AG5
D
35 37Right-handed 310
Helix 60
AG6
D
38 46Right-handed alpha
Helix 61
AG7
D
66 85Right-handed alpha
Helix 62
AG8
D
130 138Right-handed alpha
Helix 63
AG9
D
139 144Right-handed alpha
Helix 64
AH1
D
167 183Right-handed alpha
Helix 65
AH2
D
195 201Right-handed alpha
Helix 66
AH3
D
212 227Right-handed alpha
Helix 67
AH4
D
238 254Right-handed alpha
Helix 68
AH5
D
265 270Right-handed alpha
Helix 69
AH6
D
273 277Right-handed 310
Helix 70
AH7
D
288 303Right-handed alpha
Helix 71
AH8
D
317 329Right-handed alpha
Helix 72
AH9
D
337 349Right-handed alpha
Helix 73
AI1
D
356 367Right-handed alpha
Helix 74
AI2
D
378 382Right-handed 310
Helix 75
AI3
D
390 419Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 9E7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
108 110parallel
Strand 3
A
140 142parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
202 203parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
88 92parallel
Strand 3
B
117 118parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
209 210parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 285first strand
Strand 2
B
353 355parallel
Strand 3
B
370 372parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 110first strand
Strand 2
C
140 142parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
221 222first strand
Strand 2
C
242 243parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
300 303first strand
Strand 2
C
370 373parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 57first strand
Strand 2
D
27 31parallel
Strand 3
D
89 93parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
185 188first strand
Strand 2
D
155 159parallel
Strand 3
D
207 210parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
282 284first strand
Strand 2
D
306 309parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il