Analysis of interatomic Contacts of Structural Units in PDB entry:
9E91


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9E91 entry

There are 2 chains in PDB entry 9E91 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 8LYS 457
B
 GLN 3LYS 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9E91. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed 310
Helix 2
AA2
A
20 30Right-handed alpha
Helix 3
AA3
A
42 52Right-handed alpha
Helix 4
AA4
A
97 117Right-handed alpha
Helix 5
AA5
A
170 187Right-handed alpha
Helix 6
AA6
A
226 230Right-handed 310
Helix 7
AA7
A
238 257Right-handed alpha
Helix 8
AA8
A
319 332Right-handed alpha
Helix 9
AA9
A
362 383Right-handed alpha
Helix 10
AB1
A
408 421Right-handed alpha
Helix 11
AB2
A
432 437Right-handed 310
Helix 12
AB3
A
440 444Right-handed 310
Helix 13
AB4
B
6 19Right-handed alpha
Helix 14
AB5
B
20 31Right-handed alpha
Helix 15
AB6
B
48 55Right-handed alpha
Helix 16
AB7
B
98 117Right-handed alpha
Helix 17
AB8
B
127 131Right-handed 310
Helix 18
AB9
B
172 187Right-handed alpha
Helix 19
AC1
B
199 203Right-handed 310
Helix 20
AC2
B
226 230Right-handed 310
Helix 21
AC3
B
238 254Right-handed alpha
Helix 22
AC4
B
316 331Right-handed alpha
Helix 23
AC5
B
362 383Right-handed alpha
Helix 24
AC6
B
388 392Right-handed 310
Helix 25
AC7
B
412 421Right-handed alpha
Helix 26
AC8
B
432 439Right-handed 310
Helix 27
AC9
B
440 442Right-handed 310
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There are 7 sheets in PDB entry 9E91. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
61 69anti-parallel
Strand 3
A
139 146anti-parallel
Strand 4
A
149 151anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
61 69anti-parallel
Strand 3
A
139 146anti-parallel
Strand 4
A
154 155anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
426 430parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 198first strand
Strand 2
A
397 398parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 340first strand
Strand 2
A
347 351anti-parallel
Strand 3
A
354 357anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 80first strand
Strand 2
B
62 69anti-parallel
Strand 3
B
139 146anti-parallel
Strand 4
B
149 151anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 198first strand
Strand 2
B
394 398parallel
Strand 3
B
425 430parallel
Strand 4
B
87 91parallel
Strand 5
B
444 447parallel
Strand 6
B
452 453anti-parallel
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