Analysis of interatomic Contacts of Structural Units in PDB entry:
9EA5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EA5 entry

There are 2 chains in PDB entry 9EA5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LYS 456
B
 SER 3LEU 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9EA5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 22Right-handed alpha
Helix 2
AA2
A
54 58Right-handed 310
Helix 3
AA3
A
70 81Right-handed alpha
Helix 4
AA4
A
107 119Right-handed alpha
Helix 5
AA5
A
176 185Right-handed alpha
Helix 6
AA6
A
196 207Right-handed alpha
Helix 7
AA7
A
221 225Right-handed 310
Helix 8
AA8
A
232 239Right-handed alpha
Helix 9
AA9
A
241 255Right-handed alpha
Helix 10
AB1
A
268 276Right-handed alpha
Helix 11
AB2
A
287 302Right-handed alpha
Helix 12
AB3
A
348 358Right-handed alpha
Helix 13
AB4
A
381 401Right-handed alpha
Helix 14
AB5
A
407 411Right-handed 310
Helix 15
AB6
A
427 431Right-handed 310
Helix 16
AB7
A
446 454Right-handed 310
Helix 17
AB8
B
10 22Right-handed alpha
Helix 18
AB9
B
54 58Right-handed 310
Helix 19
AC1
B
70 82Right-handed alpha
Helix 20
AC2
B
107 119Right-handed alpha
Helix 21
AC3
B
176 184Right-handed alpha
Helix 22
AC4
B
196 208Right-handed alpha
Helix 23
AC5
B
221 225Right-handed 310
Helix 24
AC6
B
232 238Right-handed alpha
Helix 25
AC7
B
241 255Right-handed alpha
Helix 26
AC8
B
268 276Right-handed alpha
Helix 27
AC9
B
287 302Right-handed alpha
Helix 28
AD1
B
348 356Right-handed alpha
Helix 29
AD2
B
381 401Right-handed alpha
Helix 30
AD3
B
407 411Right-handed 310
Helix 31
AD4
B
427 431Right-handed 310
Helix 32
AD5
B
446 454Right-handed 310
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There are 8 sheets in PDB entry 9EA5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
134 140anti-parallel
Strand 3
A
123 128anti-parallel
Strand 4
A
86 92parallel
Strand 5
A
30 39anti-parallel
Strand 6
A
43 52anti-parallel
Strand 7
A
6 9parallel
Strand 8
A
150 154parallel
Strand 9
A
158 162anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
65 69anti-parallel
Strand 3
A
98 100parallel
Strand 4
A
105 106anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 262first strand
Strand 2
A
211 215parallel
Strand 3
A
187 191parallel
Strand 4
A
280 283parallel
Strand 5
A
305 311parallel
Strand 6
A
328 334anti-parallel
Strand 7
A
413 417anti-parallel
Strand 8
A
422 426anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 317first strand
Strand 2
A
321 324anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 147first strand
Strand 2
B
134 140anti-parallel
Strand 3
B
123 128anti-parallel
Strand 4
B
86 92parallel
Strand 5
B
30 39anti-parallel
Strand 6
B
43 52anti-parallel
Strand 7
B
6 9parallel
Strand 8
B
150 154parallel
Strand 9
B
158 162anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
65 69anti-parallel
Strand 3
B
97 100parallel
Strand 4
B
105 106anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 262first strand
Strand 2
B
211 215parallel
Strand 3
B
187 191parallel
Strand 4
B
280 283parallel
Strand 5
B
305 311parallel
Strand 6
B
328 334anti-parallel
Strand 7
B
413 417anti-parallel
Strand 8
B
422 426anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 317first strand
Strand 2
B
321 324anti-parallel
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