Analysis of interatomic Contacts of Structural Units in PDB entry:
9EEU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EEU entry

There are 12 chains in PDB entry 9EEU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	LYS 6	ASN 153
E	LYS 6	ASN 153
H	LYS 6	ASN 153
I	LYS 6	ASN 153
J	LYS 6	ASN 153
L	LYS 6	ASN 153
A	ALA 1	LEU 310
K	ALA 1	LEU 310
B	ALA 1	LEU 310
C	ALA 1	LEU 310
F	ALA 1	LEU 310
G	ALA 1	LEU 310

There are120 helices in PDB entry 9EEU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	25	33	Right-handed alpha
Helix 2	AA2	D	67	74	Right-handed alpha
Helix 3	AA3	D	147	152	Right-handed alpha
Helix 4	AA4	E	25	33	Right-handed alpha
Helix 5	AA5	E	67	74	Right-handed alpha
Helix 6	AA6	E	147	152	Right-handed alpha
Helix 7	AA7	H	25	33	Right-handed alpha
Helix 8	AA8	H	67	74	Right-handed alpha
Helix 9	AA9	H	147	152	Right-handed alpha
Helix 10	AB1	I	25	33	Right-handed alpha
Helix 11	AB2	I	67	74	Right-handed alpha
Helix 12	AB3	I	147	152	Right-handed alpha
Helix 13	AB4	J	25	33	Right-handed alpha
Helix 14	AB5	J	67	74	Right-handed alpha
Helix 15	AB6	J	147	152	Right-handed alpha
Helix 16	AB7	L	25	33	Right-handed alpha
Helix 17	AB8	L	67	74	Right-handed alpha
Helix 18	AB9	L	147	152	Right-handed alpha
Helix 19	AC1	A	11	15	Right-handed 310
Helix 20	AC2	A	16	33	Right-handed alpha
Helix 21	AC3	A	53	66	Right-handed alpha
Helix 22	AC4	A	79	84	Right-handed alpha
Helix 23	AC5	A	87	96	Right-handed alpha
Helix 24	AC6	A	110	117	Right-handed alpha
Helix 25	AC7	A	134	150	Right-handed alpha
Helix 26	AC8	A	166	178	Right-handed alpha
Helix 27	AC9	A	189	193	Right-handed 310
Helix 28	AD1	A	195	206	Right-handed alpha
Helix 29	AD2	A	214	219	Right-handed alpha
Helix 30	AD3	A	220	222	Right-handed 310
Helix 31	AD4	A	236	244	Right-handed alpha
Helix 32	AD5	A	245	248	Right-handed 310
Helix 33	AD6	A	250	255	Right-handed 310
Helix 34	AD7	A	274	278	Right-handed 310
Helix 35	AD8	A	284	305	Right-handed alpha
Helix 36	AD9	K	11	15	Right-handed 310
Helix 37	AE1	K	16	33	Right-handed alpha
Helix 38	AE2	K	53	66	Right-handed alpha
Helix 39	AE3	K	79	84	Right-handed alpha
Helix 40	AE4	K	87	96	Right-handed alpha
Helix 41	AE5	K	110	117	Right-handed alpha
Helix 42	AE6	K	134	150	Right-handed alpha
Helix 43	AE7	K	166	178	Right-handed alpha
Helix 44	AE8	K	189	193	Right-handed 310
Helix 45	AE9	K	195	206	Right-handed alpha
Helix 46	AF1	K	214	219	Right-handed alpha
Helix 47	AF2	K	220	222	Right-handed 310
Helix 48	AF3	K	236	244	Right-handed alpha
Helix 49	AF4	K	245	248	Right-handed 310
Helix 50	AF5	K	250	255	Right-handed 310
Helix 51	AF6	K	274	278	Right-handed 310
Helix 52	AF7	K	284	305	Right-handed alpha
Helix 53	AF8	B	11	15	Right-handed 310
Helix 54	AF9	B	16	33	Right-handed alpha
Helix 55	AG1	B	53	66	Right-handed alpha
Helix 56	AG2	B	79	84	Right-handed alpha
Helix 57	AG3	B	87	96	Right-handed alpha
Helix 58	AG4	B	110	117	Right-handed alpha
Helix 59	AG5	B	134	150	Right-handed alpha
Helix 60	AG6	B	166	178	Right-handed alpha
Helix 61	AG7	B	189	193	Right-handed 310
Helix 62	AG8	B	195	206	Right-handed alpha
Helix 63	AG9	B	214	219	Right-handed alpha
Helix 64	AH1	B	220	222	Right-handed 310
Helix 65	AH2	B	236	244	Right-handed alpha
Helix 66	AH3	B	245	248	Right-handed 310
Helix 67	AH4	B	250	255	Right-handed 310
Helix 68	AH5	B	274	278	Right-handed 310
Helix 69	AH6	B	284	305	Right-handed alpha
Helix 70	AH7	C	11	15	Right-handed 310
Helix 71	AH8	C	16	33	Right-handed alpha
Helix 72	AH9	C	53	66	Right-handed alpha
Helix 73	AI1	C	79	84	Right-handed alpha
Helix 74	AI2	C	87	96	Right-handed alpha
Helix 75	AI3	C	110	117	Right-handed alpha
Helix 76	AI4	C	134	150	Right-handed alpha
Helix 77	AI5	C	166	178	Right-handed alpha
Helix 78	AI6	C	189	193	Right-handed 310
Helix 79	AI7	C	195	206	Right-handed alpha
Helix 80	AI8	C	214	219	Right-handed alpha
Helix 81	AI9	C	220	222	Right-handed 310
Helix 82	AJ1	C	236	244	Right-handed alpha
Helix 83	AJ2	C	245	248	Right-handed 310
Helix 84	AJ3	C	250	255	Right-handed 310
Helix 85	AJ4	C	274	278	Right-handed 310
Helix 86	AJ5	C	284	305	Right-handed alpha
Helix 87	AJ6	F	11	15	Right-handed 310
Helix 88	AJ7	F	16	33	Right-handed alpha
Helix 89	AJ8	F	53	66	Right-handed alpha
Helix 90	AJ9	F	79	84	Right-handed alpha
Helix 91	AK1	F	87	96	Right-handed alpha
Helix 92	AK2	F	110	117	Right-handed alpha
Helix 93	AK3	F	134	150	Right-handed alpha
Helix 94	AK4	F	166	178	Right-handed alpha
Helix 95	AK5	F	189	193	Right-handed 310
Helix 96	AK6	F	195	206	Right-handed alpha
Helix 97	AK7	F	214	219	Right-handed alpha
Helix 98	AK8	F	220	222	Right-handed 310
Helix 99	AK9	F	236	244	Right-handed alpha
Helix 100	AL1	F	245	248	Right-handed 310
Helix 101	AL2	F	250	255	Right-handed 310
Helix 102	AL3	F	274	278	Right-handed 310
Helix 103	AL4	F	284	305	Right-handed alpha
Helix 104	AL5	G	11	15	Right-handed 310
Helix 105	AL6	G	16	33	Right-handed alpha
Helix 106	AL7	G	53	66	Right-handed alpha
Helix 107	AL8	G	79	84	Right-handed alpha
Helix 108	AL9	G	87	96	Right-handed alpha
Helix 109	AM1	G	110	117	Right-handed alpha
Helix 110	AM2	G	134	150	Right-handed alpha
Helix 111	AM3	G	166	178	Right-handed alpha
Helix 112	AM4	G	189	193	Right-handed 310
Helix 113	AM5	G	195	206	Right-handed alpha
Helix 114	AM6	G	214	219	Right-handed alpha
Helix 115	AM7	G	220	222	Right-handed 310
Helix 116	AM8	G	236	244	Right-handed alpha
Helix 117	AM9	G	245	248	Right-handed 310
Helix 118	AN1	G	250	255	Right-handed 310
Helix 119	AN2	G	274	278	Right-handed 310
Helix 120	AN3	G	284	305	Right-handed alpha

There are 21 sheets in PDB entry 9EEU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	95	first strand
Strand 2	D	82	87	anti-parallel
Strand 3	D	15	22	anti-parallel
Strand 4	D	54	62	anti-parallel
Strand 5	D	42	50	anti-parallel
Strand 6	H	42	50	anti-parallel
Strand 7	H	54	62	anti-parallel
Strand 8	H	15	22	anti-parallel
Strand 9	H	82	87	anti-parallel
Strand 10	H	90	95	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	104	first strand
Strand 2	D	124	129	anti-parallel
Strand 3	D	134	138	anti-parallel
Strand 4	D	144	146	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	95	first strand
Strand 2	E	82	87	anti-parallel
Strand 3	E	15	22	anti-parallel
Strand 4	E	54	62	anti-parallel
Strand 5	E	42	50	anti-parallel
Strand 6	I	42	50	anti-parallel
Strand 7	I	54	62	anti-parallel
Strand 8	I	15	22	anti-parallel
Strand 9	I	82	87	anti-parallel
Strand 10	I	90	95	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	104	first strand
Strand 2	E	124	129	anti-parallel
Strand 3	E	134	138	anti-parallel
Strand 4	E	144	146	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	102	104	first strand
Strand 2	H	124	129	anti-parallel
Strand 3	H	134	138	anti-parallel
Strand 4	H	144	146	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	102	104	first strand
Strand 2	I	124	129	anti-parallel
Strand 3	I	134	138	anti-parallel
Strand 4	I	144	146	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	90	95	first strand
Strand 2	J	82	87	anti-parallel
Strand 3	J	15	22	anti-parallel
Strand 4	J	54	62	anti-parallel
Strand 5	J	42	50	anti-parallel
Strand 6	L	42	50	anti-parallel
Strand 7	L	54	62	anti-parallel
Strand 8	L	15	22	anti-parallel
Strand 9	L	82	87	anti-parallel
Strand 10	L	90	95	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	102	104	first strand
Strand 2	J	124	129	anti-parallel
Strand 3	J	134	138	anti-parallel
Strand 4	J	144	146	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	102	104	first strand
Strand 2	L	124	129	anti-parallel
Strand 3	L	134	138	anti-parallel
Strand 4	L	144	146	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	73	first strand
Strand 2	A	43	48	parallel
Strand 3	A	101	106	parallel
Strand 4	A	124	129	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	212	first strand
Strand 2	A	183	187	parallel
Strand 3	A	156	160	parallel
Strand 4	A	224	227	parallel
Strand 5	A	262	264	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	69	73	first strand
Strand 2	K	43	48	parallel
Strand 3	K	101	106	parallel
Strand 4	K	124	129	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	209	212	first strand
Strand 2	K	183	187	parallel
Strand 3	K	156	160	parallel
Strand 4	K	224	227	parallel
Strand 5	K	262	264	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	73	first strand
Strand 2	B	43	48	parallel
Strand 3	B	101	106	parallel
Strand 4	B	124	129	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	212	first strand
Strand 2	B	183	187	parallel
Strand 3	B	156	160	parallel
Strand 4	B	224	227	parallel
Strand 5	B	262	264	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	73	first strand
Strand 2	C	43	48	parallel
Strand 3	C	101	106	parallel
Strand 4	C	124	129	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	212	first strand
Strand 2	C	183	187	parallel
Strand 3	C	156	160	parallel
Strand 4	C	224	227	parallel
Strand 5	C	262	264	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	73	first strand
Strand 2	F	43	48	parallel
Strand 3	F	101	106	parallel
Strand 4	F	124	129	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	209	212	first strand
Strand 2	F	183	187	parallel
Strand 3	F	156	160	parallel
Strand 4	F	224	227	parallel
Strand 5	F	262	264	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	69	73	first strand
Strand 2	G	43	48	parallel
Strand 3	G	101	106	parallel
Strand 4	G	124	129	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	209	212	first strand
Strand 2	G	183	187	parallel
Strand 3	G	156	160	parallel
Strand 4	G	224	227	parallel
Strand 5	G	262	264	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EEU

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EEU