Analysis of interatomic Contacts of Structural Units in PDB entry:
9EG1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EG1 entry

There are 11 chains in PDB entry 9EG1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LYS 64	ALA 443
D	MET 1	ALA 405
E	THR 12	ILE 333
F	GLY 37	GLN 316
G	ASN 10	ALA 222
H	PHE 11	ASN 209
J	LYS 403	MET 779
K	LYS 28	LYS 113
A	TYR 35	LYS 467
C	SER 3	LYS 406
I	MET 1	GLY 76

There are146 helices in PDB entry 9EG1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	64	81	Right-handed alpha
Helix 2	AA2	B	84	103	Right-handed alpha
Helix 3	AA3	B	107	118	Right-handed alpha
Helix 4	AA4	B	119	121	Right-handed 310
Helix 5	AA5	B	124	139	Right-handed alpha
Helix 6	AA6	B	144	156	Right-handed alpha
Helix 7	AA7	B	163	168	Right-handed alpha
Helix 8	AA8	B	171	180	Right-handed alpha
Helix 9	AA9	B	190	208	Right-handed alpha
Helix 10	AB1	B	210	222	Right-handed alpha
Helix 11	AB2	B	232	249	Right-handed alpha
Helix 12	AB3	B	250	268	Right-handed alpha
Helix 13	AB4	B	275	286	Right-handed alpha
Helix 14	AB5	B	299	305	Right-handed 310
Helix 15	AB6	B	308	319	Right-handed alpha
Helix 16	AB7	B	323	333	Right-handed alpha
Helix 17	AB8	B	342	347	Right-handed alpha
Helix 18	AB9	B	352	363	Right-handed alpha
Helix 19	AC1	B	371	379	Right-handed alpha
Helix 20	AC2	B	381	395	Right-handed alpha
Helix 21	AC3	B	418	440	Right-handed alpha
Helix 22	AC4	D	4	14	Right-handed alpha
Helix 23	AC5	D	20	35	Right-handed alpha
Helix 24	AC6	D	39	54	Right-handed alpha
Helix 25	AC7	D	61	73	Right-handed alpha
Helix 26	AC8	D	77	93	Right-handed alpha
Helix 27	AC9	D	101	117	Right-handed alpha
Helix 28	AD1	D	121	129	Right-handed alpha
Helix 29	AD2	D	140	158	Right-handed alpha
Helix 30	AD3	D	160	176	Right-handed alpha
Helix 31	AD4	D	180	198	Right-handed alpha
Helix 32	AD5	D	200	212	Right-handed alpha
Helix 33	AD6	D	218	236	Right-handed alpha
Helix 34	AD7	D	239	252	Right-handed alpha
Helix 35	AD8	D	253	258	Right-handed 310
Helix 36	AD9	D	260	269	Right-handed alpha
Helix 37	AE1	D	278	285	Right-handed alpha
Helix 38	AE2	D	286	290	Right-handed 310
Helix 39	AE3	D	299	313	Right-handed alpha
Helix 40	AE4	D	321	327	Right-handed alpha
Helix 41	AE5	D	333	343	Right-handed alpha
Helix 42	AE6	D	366	392	Right-handed alpha
Helix 43	AE7	D	392	405	Right-handed alpha
Helix 44	AE8	E	23	28	Right-handed alpha
Helix 45	AE9	E	32	43	Right-handed alpha
Helix 46	AF1	E	44	47	Right-handed 310
Helix 47	AF2	E	59	73	Right-handed alpha
Helix 48	AF3	E	110	128	Right-handed alpha
Helix 49	AF4	E	148	162	Right-handed alpha
Helix 50	AF5	E	171	179	Right-handed alpha
Helix 51	AF6	E	231	243	Right-handed alpha
Helix 52	AF7	E	245	252	Right-handed alpha
Helix 53	AF8	E	258	281	Right-handed alpha
Helix 54	AF9	E	299	329	Right-handed alpha
Helix 55	AG1	F	46	63	Right-handed alpha
Helix 56	AG2	F	101	112	Right-handed alpha
Helix 57	AG3	F	132	146	Right-handed alpha
Helix 58	AG4	F	195	207	Right-handed alpha
Helix 59	AG5	F	215	248	Right-handed alpha
Helix 60	AG6	F	255	266	Right-handed alpha
Helix 61	AG7	F	272	313	Right-handed alpha
Helix 62	AG8	G	11	17	Right-handed alpha
Helix 63	AG9	G	18	20	Right-handed 310
Helix 64	AH1	G	24	37	Right-handed alpha
Helix 65	AH2	G	44	49	Right-handed alpha
Helix 66	AH3	G	49	54	Right-handed alpha
Helix 67	AH4	G	55	57	Right-handed 310
Helix 68	AH5	G	60	72	Right-handed alpha
Helix 69	AH6	G	76	81	Right-handed alpha
Helix 70	AH7	G	89	108	Right-handed alpha
Helix 71	AH8	G	113	121	Right-handed alpha
Helix 72	AH9	G	124	139	Right-handed alpha
Helix 73	AI1	G	166	221	Right-handed alpha
Helix 74	AI2	H	12	26	Right-handed alpha
Helix 75	AI3	H	33	47	Right-handed alpha
Helix 76	AI4	H	49	60	Right-handed alpha
Helix 77	AI5	H	61	68	Right-handed alpha
Helix 78	AI6	H	69	83	Right-handed alpha
Helix 79	AI7	H	85	94	Right-handed alpha
Helix 80	AI8	H	99	101	Right-handed 310
Helix 81	AI9	H	102	124	Right-handed alpha
Helix 82	AJ1	H	130	138	Right-handed alpha
Helix 83	AJ2	H	142	151	Right-handed alpha
Helix 84	AJ3	H	196	209	Right-handed alpha
Helix 85	AJ4	J	405	416	Right-handed alpha
Helix 86	AJ5	J	428	444	Right-handed alpha
Helix 87	AJ6	J	446	463	Right-handed alpha
Helix 88	AJ7	J	470	484	Right-handed alpha
Helix 89	AJ8	J	486	514	Right-handed alpha
Helix 90	AJ9	J	533	537	Right-handed alpha
Helix 91	AK1	J	550	553	Right-handed 310
Helix 92	AK2	J	554	566	Right-handed alpha
Helix 93	AK3	J	597	606	Right-handed alpha
Helix 94	AK4	J	615	624	Right-handed alpha
Helix 95	AK5	J	627	639	Right-handed alpha
Helix 96	AK6	J	675	679	Right-handed 310
Helix 97	AK7	J	707	726	Right-handed alpha
Helix 98	AK8	J	730	742	Right-handed alpha
Helix 99	AK9	J	749	763	Right-handed alpha
Helix 100	AL1	K	61	68	Right-handed alpha
Helix 101	AL2	K	85	96	Right-handed alpha
Helix 102	AL3	A	44	50	Right-handed alpha
Helix 103	AL4	A	53	67	Right-handed alpha
Helix 104	AL5	A	70	83	Right-handed alpha
Helix 105	AL6	A	88	102	Right-handed alpha
Helix 106	AL7	A	127	156	Right-handed alpha
Helix 107	AL8	A	157	176	Right-handed alpha
Helix 108	AL9	A	177	189	Right-handed alpha
Helix 109	AM1	A	190	192	Right-handed 310
Helix 110	AM2	A	194	213	Right-handed alpha
Helix 111	AM3	A	214	228	Right-handed alpha
Helix 112	AM4	A	243	260	Right-handed alpha
Helix 113	AM5	A	262	271	Right-handed alpha
Helix 114	AM6	A	285	301	Right-handed alpha
Helix 115	AM7	A	302	310	Right-handed alpha
Helix 116	AM8	A	313	315	Right-handed 310
Helix 117	AM9	A	316	323	Right-handed alpha
Helix 118	AN1	A	323	335	Right-handed alpha
Helix 119	AN2	A	337	353	Right-handed alpha
Helix 120	AN3	A	362	379	Right-handed alpha
Helix 121	AN4	A	386	393	Right-handed alpha
Helix 122	AN5	A	396	411	Right-handed alpha
Helix 123	AN6	A	430	462	Right-handed alpha
Helix 124	AN7	C	4	16	Right-handed alpha
Helix 125	AN8	C	20	29	Right-handed alpha
Helix 126	AN9	C	36	41	Right-handed 310
Helix 127	AO1	C	42	47	Right-handed alpha
Helix 128	AO2	C	53	64	Right-handed alpha
Helix 129	AO3	C	73	88	Right-handed alpha
Helix 130	AO4	C	91	97	Right-handed 310
Helix 131	AO5	C	98	114	Right-handed alpha
Helix 132	AO6	C	122	130	Right-handed alpha
Helix 133	AO7	C	141	152	Right-handed alpha
Helix 134	AO8	C	155	162	Right-handed 310
Helix 135	AO9	C	177	195	Right-handed alpha
Helix 136	AP1	C	197	210	Right-handed alpha
Helix 137	AP2	C	217	235	Right-handed alpha
Helix 138	AP3	C	252	257	Right-handed alpha
Helix 139	AP4	C	258	267	Right-handed alpha
Helix 140	AP5	C	271	282	Right-handed alpha
Helix 141	AP6	C	282	289	Right-handed alpha
Helix 142	AP7	C	293	311	Right-handed alpha
Helix 143	AP8	C	319	323	Right-handed alpha
Helix 144	AP9	C	330	344	Right-handed alpha
Helix 145	AQ1	C	369	399	Right-handed alpha
Helix 146	AQ2	I	22	34	Right-handed alpha

There are 12 sheets in PDB entry 9EG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	408	411	anti-parallel
Strand 3	B	400	403	anti-parallel
Strand 4	A	381	385	parallel
Strand 5	A	423	426	anti-parallel
Strand 6	A	415	418	anti-parallel
Strand 7	C	314	318	parallel
Strand 8	C	357	360	anti-parallel
Strand 9	C	349	352	anti-parallel
Strand 10	H	125	129	parallel
Strand 11	H	161	163	anti-parallel
Strand 12	H	154	156	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	318	320	first strand
Strand 2	D	358	360	anti-parallel
Strand 3	D	351	353	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	184	186	first strand
Strand 2	E	166	170	anti-parallel
Strand 3	E	132	139	parallel
Strand 4	E	78	86	anti-parallel
Strand 5	E	89	97	anti-parallel
Strand 6	E	54	58	parallel
Strand 7	E	225	229	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	185	first strand
Strand 2	F	166	172	anti-parallel
Strand 3	F	150	154	anti-parallel
Strand 4	F	120	127	parallel
Strand 5	F	72	77	anti-parallel
Strand 6	F	80	85	anti-parallel
Strand 7	F	40	42	parallel
Strand 8	F	188	189	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	94	first strand
Strand 2	F	97	100	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	110	112	first strand
Strand 2	G	151	157	anti-parallel
Strand 3	G	141	146	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	532	first strand
Strand 2	K	31	43	parallel
Strand 3	J	569	573	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	532	first strand
Strand 2	K	31	43	parallel
Strand 3	J	579	583	anti-parallel
Strand 4	J	592	596	anti-parallel
Strand 5	J	685	687	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	728	729	first strand
Strand 2	J	776	778	anti-parallel
Strand 3	J	766	768	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	138	first strand
Strand 2	C	168	169	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	6	first strand
Strand 2	I	12	15	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	41	44	first strand
Strand 2	I	68	71	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EG1

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EG1