Analysis of interatomic Contacts of Structural Units in PDB entry:
9EG4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EG4 entry

There are 14 chains in PDB entry 9EG4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	PRO 289
H	ALA 2	PHE 90
I	ALA 2	PHE 90
J	ALA 2	PHE 90
C	SER 2	PRO 289
E	SER 2	PRO 289
K	ALA 2	PHE 90
L	ALA 2	PHE 90
M	ALA 2	PHE 90
D	SER 2	PRO 289
F	SER 2	PRO 289
B	SER 2	PRO 289
G	SER 2	PRO 289
N	ALA 2	PHE 90

There are 77 helices in PDB entry 9EG4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	9	Right-handed 310
Helix 2	AA2	A	88	90	Right-handed 310
Helix 3	AA3	A	96	123	Right-handed alpha
Helix 4	AA4	A	146	162	Right-handed alpha
Helix 5	AA5	A	172	180	Right-handed alpha
Helix 6	AA6	A	182	187	Right-handed alpha
Helix 7	AA7	A	276	278	Right-handed 310
Helix 8	AA8	H	4	6	Right-handed 310
Helix 9	AA9	H	35	40	Right-handed alpha
Helix 10	AB1	H	43	49	Right-handed 310
Helix 11	AB2	H	51	55	Right-handed 310
Helix 12	AB3	I	4	6	Right-handed 310
Helix 13	AB4	I	35	40	Right-handed alpha
Helix 14	AB5	I	43	49	Right-handed 310
Helix 15	AB6	J	4	6	Right-handed 310
Helix 16	AB7	J	35	40	Right-handed alpha
Helix 17	AB8	J	43	49	Right-handed 310
Helix 18	AB9	C	2	9	Right-handed 310
Helix 19	AC1	C	88	90	Right-handed 310
Helix 20	AC2	C	96	123	Right-handed alpha
Helix 21	AC3	C	146	160	Right-handed alpha
Helix 22	AC4	C	173	180	Right-handed alpha
Helix 23	AC5	C	182	187	Right-handed alpha
Helix 24	AC6	C	194	198	Right-handed 310
Helix 25	AC7	C	276	278	Right-handed 310
Helix 26	AC8	E	2	9	Right-handed 310
Helix 27	AC9	E	88	90	Right-handed 310
Helix 28	AD1	E	96	123	Right-handed alpha
Helix 29	AD2	E	146	160	Right-handed alpha
Helix 30	AD3	E	173	180	Right-handed alpha
Helix 31	AD4	E	182	187	Right-handed alpha
Helix 32	AD5	E	194	198	Right-handed 310
Helix 33	AD6	E	276	278	Right-handed 310
Helix 34	AD7	K	4	6	Right-handed 310
Helix 35	AD8	K	35	41	Right-handed alpha
Helix 36	AD9	K	43	49	Right-handed 310
Helix 37	AE1	L	4	6	Right-handed 310
Helix 38	AE2	L	35	40	Right-handed alpha
Helix 39	AE3	L	43	49	Right-handed 310
Helix 40	AE4	M	4	6	Right-handed 310
Helix 41	AE5	M	35	40	Right-handed alpha
Helix 42	AE6	M	43	49	Right-handed 310
Helix 43	AE7	D	2	9	Right-handed 310
Helix 44	AE8	D	88	90	Right-handed 310
Helix 45	AE9	D	96	123	Right-handed alpha
Helix 46	AF1	D	146	160	Right-handed alpha
Helix 47	AF2	D	172	180	Right-handed alpha
Helix 48	AF3	D	182	187	Right-handed alpha
Helix 49	AF4	D	194	198	Right-handed 310
Helix 50	AF5	D	276	278	Right-handed 310
Helix 51	AF6	F	2	9	Right-handed 310
Helix 52	AF7	F	88	90	Right-handed 310
Helix 53	AF8	F	96	123	Right-handed alpha
Helix 54	AF9	F	146	160	Right-handed alpha
Helix 55	AG1	F	173	180	Right-handed alpha
Helix 56	AG2	F	182	187	Right-handed alpha
Helix 57	AG3	F	194	198	Right-handed 310
Helix 58	AG4	F	276	278	Right-handed 310
Helix 59	AG5	B	2	9	Right-handed 310
Helix 60	AG6	B	88	90	Right-handed 310
Helix 61	AG7	B	96	123	Right-handed alpha
Helix 62	AG8	B	146	160	Right-handed alpha
Helix 63	AG9	B	173	180	Right-handed alpha
Helix 64	AH1	B	182	187	Right-handed alpha
Helix 65	AH2	B	194	198	Right-handed 310
Helix 66	AH3	B	276	278	Right-handed 310
Helix 67	AH4	G	2	9	Right-handed 310
Helix 68	AH5	G	88	90	Right-handed 310
Helix 69	AH6	G	96	123	Right-handed alpha
Helix 70	AH7	G	146	160	Right-handed alpha
Helix 71	AH8	G	173	180	Right-handed alpha
Helix 72	AH9	G	182	187	Right-handed alpha
Helix 73	AI1	G	194	198	Right-handed 310
Helix 74	AI2	G	276	278	Right-handed 310
Helix 75	AI3	N	4	6	Right-handed 310
Helix 76	AI4	N	35	40	Right-handed alpha
Helix 77	AI5	N	43	49	Right-handed 310

There are 41 sheets in PDB entry 9EG4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	36	first strand
Strand 2	A	241	256	parallel
Strand 3	A	261	274	anti-parallel
Strand 4	A	77	86	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	48	first strand
Strand 2	A	69	75	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	135	138	parallel
Strand 3	A	280	286	parallel
Strand 4	A	230	237	anti-parallel
Strand 5	A	167	171	anti-parallel
Strand 6	A	210	213	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	135	138	parallel
Strand 3	A	280	286	parallel
Strand 4	A	230	237	anti-parallel
Strand 5	A	224	225	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	8	10	first strand
Strand 2	H	22	26	anti-parallel
Strand 3	H	64	68	parallel
Strand 4	H	73	80	anti-parallel
Strand 5	H	86	89	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	8	10	first strand
Strand 2	I	22	25	anti-parallel
Strand 3	I	64	68	parallel
Strand 4	I	73	80	anti-parallel
Strand 5	I	86	89	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	8	10	first strand
Strand 2	J	22	27	anti-parallel
Strand 3	J	64	69	parallel
Strand 4	J	73	80	anti-parallel
Strand 5	J	86	89	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	13	first strand
Strand 2	D	42	48	parallel
Strand 3	C	18	19	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	13	first strand
Strand 2	D	42	48	parallel
Strand 3	D	69	75	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	36	first strand
Strand 2	C	241	256	parallel
Strand 3	C	261	274	anti-parallel
Strand 4	C	77	86	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	75	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	B	11	13	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	75	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	B	18	19	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	B	77	86	anti-parallel
Strand 3	B	261	274	anti-parallel
Strand 4	B	241	256	anti-parallel
Strand 5	B	33	36	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	135	138	parallel
Strand 3	C	280	286	parallel
Strand 4	C	230	237	anti-parallel
Strand 5	C	167	172	anti-parallel
Strand 6	C	209	214	parallel
Strand 7	C	205	206	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	135	138	parallel
Strand 3	C	280	286	parallel
Strand 4	C	230	237	anti-parallel
Strand 5	C	224	225	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	13	first strand
Strand 2	F	42	48	parallel
Strand 3	E	18	19	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	13	first strand
Strand 2	F	42	48	parallel
Strand 3	F	69	75	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	36	first strand
Strand 2	E	241	256	parallel
Strand 3	E	261	274	anti-parallel
Strand 4	E	77	86	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	69	75	first strand
Strand 2	E	42	48	anti-parallel
Strand 3	D	11	13	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	69	75	first strand
Strand 2	E	42	48	anti-parallel
Strand 3	D	18	19	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	127	first strand
Strand 2	E	135	138	parallel
Strand 3	E	280	286	parallel
Strand 4	E	230	237	anti-parallel
Strand 5	E	167	172	anti-parallel
Strand 6	E	209	214	parallel
Strand 7	E	205	206	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	127	first strand
Strand 2	E	135	138	parallel
Strand 3	E	280	286	parallel
Strand 4	E	230	237	anti-parallel
Strand 5	E	224	225	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	8	10	first strand
Strand 2	K	22	27	anti-parallel
Strand 3	K	64	69	parallel
Strand 4	K	73	80	anti-parallel
Strand 5	K	86	89	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	8	10	first strand
Strand 2	L	22	25	anti-parallel
Strand 3	L	64	68	parallel
Strand 4	L	73	80	anti-parallel
Strand 5	L	86	89	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	8	10	first strand
Strand 2	M	22	26	anti-parallel
Strand 3	M	64	68	parallel
Strand 4	M	73	80	anti-parallel
Strand 5	M	86	89	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	36	first strand
Strand 2	D	241	256	parallel
Strand 3	D	261	274	anti-parallel
Strand 4	D	77	86	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	127	first strand
Strand 2	D	135	138	parallel
Strand 3	D	280	286	parallel
Strand 4	D	230	237	anti-parallel
Strand 5	D	167	171	anti-parallel
Strand 6	D	209	213	parallel
Strand 7	D	205	206	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	127	first strand
Strand 2	D	135	138	parallel
Strand 3	D	280	286	parallel
Strand 4	D	230	237	anti-parallel
Strand 5	D	224	225	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	13	first strand
Strand 2	G	42	48	parallel
Strand 3	F	18	19	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	13	first strand
Strand 2	G	42	48	parallel
Strand 3	G	69	75	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	36	first strand
Strand 2	F	241	256	parallel
Strand 3	F	261	274	anti-parallel
Strand 4	F	77	86	anti-parallel

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There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	127	first strand
Strand 2	F	135	138	parallel
Strand 3	F	280	286	parallel
Strand 4	F	230	237	anti-parallel
Strand 5	F	167	172	anti-parallel
Strand 6	F	209	214	parallel
Strand 7	F	205	206	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	127	first strand
Strand 2	F	135	138	parallel
Strand 3	F	280	286	parallel
Strand 4	F	230	237	anti-parallel
Strand 5	F	224	225	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	75	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	G	11	13	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	75	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	G	18	19	parallel

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There are 7 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	135	138	parallel
Strand 3	B	280	286	parallel
Strand 4	B	230	237	anti-parallel
Strand 5	B	167	172	anti-parallel
Strand 6	B	209	214	parallel
Strand 7	B	205	206	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	135	138	parallel
Strand 3	B	280	286	parallel
Strand 4	B	230	237	anti-parallel
Strand 5	B	224	225	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	36	first strand
Strand 2	G	241	256	parallel
Strand 3	G	261	274	anti-parallel
Strand 4	G	77	86	anti-parallel

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There are 7 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	127	first strand
Strand 2	G	135	138	parallel
Strand 3	G	280	286	parallel
Strand 4	G	230	237	anti-parallel
Strand 5	G	167	172	anti-parallel
Strand 6	G	209	214	parallel
Strand 7	G	205	206	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	127	first strand
Strand 2	G	135	138	parallel
Strand 3	G	280	286	parallel
Strand 4	G	230	237	anti-parallel
Strand 5	G	224	225	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	8	10	first strand
Strand 2	N	22	26	anti-parallel
Strand 3	N	64	68	parallel
Strand 4	N	73	80	anti-parallel
Strand 5	N	86	89	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EG4

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EG4