Analysis of interatomic Contacts of Structural Units in PDB entry:
9EGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EGK entry

There is 1 chain in PDB entry 9EGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ALA 3268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are157 helices in PDB entry 9EGK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
19 28Right-handed alpha
Helix 3
AA3
A
31 39Right-handed alpha
Helix 4
AA4
A
54 72Right-handed alpha
Helix 5
AA5
A
90 102Right-handed alpha
Helix 6
AA6
A
102 110Right-handed alpha
Helix 7
AA7
A
113 117Right-handed 310
Helix 8
AA8
A
121 128Right-handed alpha
Helix 9
AA9
A
131 153Right-handed alpha
Helix 10
AB1
A
159 163Right-handed 310
Helix 11
AB2
A
164 176Right-handed alpha
Helix 12
AB3
A
191 197Right-handed 310
Helix 13
AB4
A
250 262Right-handed alpha
Helix 14
AB5
A
263 265Right-handed 310
Helix 15
AB6
A
266 282Right-handed alpha
Helix 16
AB7
A
286 309Right-handed alpha
Helix 17
AB8
A
310 318Right-handed alpha
Helix 18
AB9
A
324 333Right-handed alpha
Helix 19
AC1
A
341 356Right-handed alpha
Helix 20
AC2
A
358 370Right-handed alpha
Helix 21
AC3
A
376 390Right-handed alpha
Helix 22
AC4
A
397 412Right-handed alpha
Helix 23
AC5
A
414 425Right-handed alpha
Helix 24
AC6
A
425 431Right-handed alpha
Helix 25
AC7
A
441 456Right-handed alpha
Helix 26
AC8
A
458 468Right-handed alpha
Helix 27
AC9
A
469 488Right-handed alpha
Helix 28
AD1
A
505 522Right-handed alpha
Helix 29
AD2
A
526 536Right-handed alpha
Helix 30
AD3
A
538 548Right-handed alpha
Helix 31
AD4
A
549 554Right-handed alpha
Helix 32
AD5
A
555 570Right-handed alpha
Helix 33
AD6
A
572 574Right-handed 310
Helix 34
AD7
A
575 582Right-handed alpha
Helix 35
AD8
A
583 591Right-handed alpha
Helix 36
AD9
A
592 596Right-handed 310
Helix 37
AE1
A
599 604Right-handed alpha
Helix 38
AE2
A
605 614Right-handed alpha
Helix 39
AE3
A
616 625Right-handed alpha
Helix 40
AE4
A
626 628Right-handed 310
Helix 41
AE5
A
633 637Right-handed 310
Helix 42
AE6
A
638 646Right-handed alpha
Helix 43
AE7
A
648 665Right-handed alpha
Helix 44
AE8
A
668 681Right-handed alpha
Helix 45
AE9
A
682 687Right-handed 310
Helix 46
AF1
A
727 744Right-handed alpha
Helix 47
AF2
A
758 764Right-handed alpha
Helix 48
AF3
A
774 778Right-handed 310
Helix 49
AF4
A
779 788Right-handed alpha
Helix 50
AF5
A
789 795Right-handed alpha
Helix 51
AF6
A
799 814Right-handed alpha
Helix 52
AF7
A
827 831Right-handed 310
Helix 53
AF8
A
834 857Right-handed alpha
Helix 54
AF9
A
864 879Right-handed alpha
Helix 55
AG1
A
882 896Right-handed alpha
Helix 56
AG2
A
900 904Right-handed 310
Helix 57
AG3
A
905 912Right-handed alpha
Helix 58
AG4
A
933 937Right-handed 310
Helix 59
AG5
A
945 975Right-handed alpha
Helix 60
AG6
A
975 980Right-handed alpha
Helix 61
AG7
A
985 990Right-handed alpha
Helix 62
AG8
A
990 1009Right-handed alpha
Helix 63
AG9
A
1014 1029Right-handed alpha
Helix 64
AH1
A
1043 1053Right-handed alpha
Helix 65
AH2
A
1054 1067Right-handed alpha
Helix 66
AH3
A
1077 1082Right-handed 310
Helix 67
AH4
A
1088 1107Right-handed alpha
Helix 68
AH5
A
1118 1122Right-handed 310
Helix 69
AH6
A
1131 1154Right-handed alpha
Helix 70
AH7
A
1166 1181Right-handed alpha
Helix 71
AH8
A
1195 1199Right-handed 310
Helix 72
AH9
A
1202 1212Right-handed alpha
Helix 73
AI1
A
1217 1227Right-handed alpha
Helix 74
AI2
A
1254 1259Right-handed 310
Helix 75
AI3
A
1272 1286Right-handed alpha
Helix 76
AI4
A
1291 1299Right-handed 310
Helix 77
AI5
A
1303 1317Right-handed alpha
Helix 78
AI6
A
1320 1333Right-handed alpha
Helix 79
AI7
A
1341 1355Right-handed alpha
Helix 80
AI8
A
1356 1361Right-handed alpha
Helix 81
AI9
A
1363 1378Right-handed alpha
Helix 82
AJ1
A
1379 1383Right-handed 310
Helix 83
AJ2
A
1386 1403Right-handed alpha
Helix 84
AJ3
A
1430 1442Right-handed alpha
Helix 85
AJ4
A
1449 1464Right-handed alpha
Helix 86
AJ5
A
1466 1477Right-handed alpha
Helix 87
AJ6
A
1477 1489Right-handed alpha
Helix 88
AJ7
A
1494 1511Right-handed alpha
Helix 89
AJ8
A
1512 1528Right-handed alpha
Helix 90
AJ9
A
1543 1550Right-handed alpha
Helix 91
AK1
A
1550 1557Right-handed alpha
Helix 92
AK2
A
1557 1567Right-handed alpha
Helix 93
AK3
A
1604 1609Right-handed alpha
Helix 94
AK4
A
1611 1624Right-handed alpha
Helix 95
AK5
A
1651 1671Right-handed alpha
Helix 96
AK6
A
1671 1680Right-handed alpha
Helix 97
AK7
A
1695 1703Right-handed alpha
Helix 98
AK8
A
1715 1738Right-handed alpha
Helix 99
AK9
A
1745 1750Right-handed 310
Helix 100
AL1
A
1754 1776Right-handed alpha
Helix 101
AL2
A
1778 1785Right-handed alpha
Helix 102
AL3
A
1787 1801Right-handed alpha
Helix 103
AL4
A
1817 1831Right-handed alpha
Helix 104
AL5
A
1834 1841Right-handed alpha
Helix 105
AL6
A
1849 1871Right-handed alpha
Helix 106
AL7
A
2226 2239Right-handed alpha
Helix 107
AL8
A
2243 2247Right-handed 310
Helix 108
AL9
A
2248 2255Right-handed alpha
Helix 109
AM1
A
2260 2276Right-handed alpha
Helix 110
AM2
A
2327 2331Right-handed 310
Helix 111
AM3
A
2334 2338Right-handed 310
Helix 112
AM4
A
2344 2364Right-handed alpha
Helix 113
AM5
A
2371 2375Right-handed 310
Helix 114
AM6
A
2376 2381Right-handed alpha
Helix 115
AM7
A
2383 2398Right-handed alpha
Helix 116
AM8
A
2456 2465Right-handed alpha
Helix 117
AM9
A
2466 2469Right-handed 310
Helix 118
AN1
A
2474 2486Right-handed alpha
Helix 119
AN2
A
2489 2507Right-handed alpha
Helix 120
AN3
A
2512 2526Right-handed alpha
Helix 121
AN4
A
2542 2561Right-handed alpha
Helix 122
AN5
A
2564 2570Right-handed alpha
Helix 123
AN6
A
2597 2603Right-handed alpha
Helix 124
AN7
A
2604 2607Right-handed 310
Helix 125
AN8
A
2613 2639Right-handed alpha
Helix 126
AN9
A
2642 2648Right-handed alpha
Helix 127
AO1
A
2654 2664Right-handed alpha
Helix 128
AO2
A
2665 2667Right-handed 310
Helix 129
AO3
A
2671 2688Right-handed alpha
Helix 130
AO4
A
2691 2723Right-handed alpha
Helix 131
AO5
A
2731 2740Right-handed alpha
Helix 132
AO6
A
2743 2761Right-handed alpha
Helix 133
AO7
A
2769 2780Right-handed alpha
Helix 134
AO8
A
2782 2798Right-handed alpha
Helix 135
AO9
A
2805 2808Right-handed 310
Helix 136
AP1
A
2809 2820Right-handed alpha
Helix 137
AP2
A
2851 2859Right-handed alpha
Helix 138
AP3
A
2859 2870Right-handed alpha
Helix 139
AP4
A
2871 2884Right-handed 310
Helix 140
AP5
A
2889 2902Right-handed alpha
Helix 141
AP6
A
2919 2929Right-handed alpha
Helix 142
AP7
A
2932 2939Right-handed alpha
Helix 143
AP8
A
2955 2969Right-handed alpha
Helix 144
AP9
A
2991 2995Right-handed 310
Helix 145
AQ1
A
2998 3016Right-handed alpha
Helix 146
AQ2
A
3024 3032Right-handed alpha
Helix 147
AQ3
A
3038 3045Right-handed alpha
Helix 148
AQ4
A
3045 3057Right-handed alpha
Helix 149
AQ5
A
3096 3110Right-handed alpha
Helix 150
AQ6
A
3115 3128Right-handed alpha
Helix 151
AQ7
A
3129 3133Right-handed 310
Helix 152
AQ8
A
3138 3146Right-handed alpha
Helix 153
AQ9
A
3154 3159Right-handed alpha
Helix 154
AR1
A
3170 3182Right-handed alpha
Helix 155
AR2
A
3183 3193Right-handed alpha
Helix 156
AR3
A
3233 3236Right-handed 310
Helix 157
AR4
A
3246 3260Right-handed alpha
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There are 5 sheets in PDB entry 9EGK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
111 112parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
239 240anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1030 1031first strand
Strand 2
A
1041 1042anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1540 1542first strand
Strand 2
A
1584 1585anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3218 3220first strand
Strand 2
A
3238 3240parallel
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