Analysis of interatomic Contacts of Structural Units in PDB entry:
9EGL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EGL entry

There are 11 chains in PDB entry 9EGL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 37	LYS 467
B	ASN 29	ALA 443
C	SER 3	SER 407
D	MET 1	ALA 405
E	ASN 18	ILE 333
F	GLY 37	GLN 316
G	ASN 10	ALA 222
H	PHE 11	ASN 209
I	MET 1	GLY 76
J	ASN 308	ALA 768
K	LYS 19	TYR 106

There are158 helices in PDB entry 9EGL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	51	Right-handed alpha
Helix 2	AA2	A	53	67	Right-handed alpha
Helix 3	AA3	A	70	82	Right-handed alpha
Helix 4	AA4	A	88	102	Right-handed alpha
Helix 5	AA5	A	128	156	Right-handed alpha
Helix 6	AA6	A	157	176	Right-handed alpha
Helix 7	AA7	A	177	189	Right-handed alpha
Helix 8	AA8	A	190	192	Right-handed 310
Helix 9	AA9	A	194	213	Right-handed alpha
Helix 10	AB1	A	214	228	Right-handed alpha
Helix 11	AB2	A	231	234	Right-handed 310
Helix 12	AB3	A	235	240	Right-handed alpha
Helix 13	AB4	A	244	260	Right-handed alpha
Helix 14	AB5	A	262	272	Right-handed alpha
Helix 15	AB6	A	274	278	Right-handed 310
Helix 16	AB7	A	285	301	Right-handed alpha
Helix 17	AB8	A	302	309	Right-handed alpha
Helix 18	AB9	A	313	323	Right-handed alpha
Helix 19	AC1	A	323	335	Right-handed alpha
Helix 20	AC2	A	338	353	Right-handed alpha
Helix 21	AC3	A	358	360	Right-handed 310
Helix 22	AC4	A	361	379	Right-handed alpha
Helix 23	AC5	A	386	393	Right-handed alpha
Helix 24	AC6	A	396	409	Right-handed alpha
Helix 25	AC7	A	430	463	Right-handed alpha
Helix 26	AC8	B	30	41	Right-handed alpha
Helix 27	AC9	B	48	61	Right-handed alpha
Helix 28	AD1	B	65	81	Right-handed alpha
Helix 29	AD2	B	84	99	Right-handed alpha
Helix 30	AD3	B	104	121	Right-handed alpha
Helix 31	AD4	B	124	142	Right-handed alpha
Helix 32	AD5	B	147	162	Right-handed alpha
Helix 33	AD6	B	166	180	Right-handed alpha
Helix 34	AD7	B	190	208	Right-handed alpha
Helix 35	AD8	B	210	224	Right-handed alpha
Helix 36	AD9	B	232	249	Right-handed alpha
Helix 37	AE1	B	252	268	Right-handed alpha
Helix 38	AE2	B	273	287	Right-handed alpha
Helix 39	AE3	B	292	300	Right-handed 310
Helix 40	AE4	B	305	319	Right-handed alpha
Helix 41	AE5	B	322	333	Right-handed alpha
Helix 42	AE6	B	333	338	Right-handed alpha
Helix 43	AE7	B	343	347	Right-handed 310
Helix 44	AE8	B	352	364	Right-handed alpha
Helix 45	AE9	B	371	379	Right-handed alpha
Helix 46	AF1	B	381	395	Right-handed alpha
Helix 47	AF2	B	418	440	Right-handed alpha
Helix 48	AF3	C	4	19	Right-handed alpha
Helix 49	AF4	C	21	29	Right-handed alpha
Helix 50	AF5	C	31	36	Right-handed alpha
Helix 51	AF6	C	41	47	Right-handed alpha
Helix 52	AF7	C	54	68	Right-handed alpha
Helix 53	AF8	C	73	87	Right-handed alpha
Helix 54	AF9	C	91	95	Right-handed 310
Helix 55	AG1	C	96	114	Right-handed alpha
Helix 56	AG2	C	117	119	Right-handed 310
Helix 57	AG3	C	120	132	Right-handed alpha
Helix 58	AG4	C	139	153	Right-handed alpha
Helix 59	AG5	C	155	158	Right-handed 310
Helix 60	AG6	C	159	164	Right-handed alpha
Helix 61	AG7	C	177	180	Right-handed 310
Helix 62	AG8	C	181	194	Right-handed alpha
Helix 63	AG9	C	197	210	Right-handed alpha
Helix 64	AH1	C	217	235	Right-handed alpha
Helix 65	AH2	C	252	257	Right-handed alpha
Helix 66	AH3	C	257	268	Right-handed alpha
Helix 67	AH4	C	273	282	Right-handed alpha
Helix 68	AH5	C	282	290	Right-handed alpha
Helix 69	AH6	C	295	312	Right-handed alpha
Helix 70	AH7	C	319	327	Right-handed alpha
Helix 71	AH8	C	330	345	Right-handed alpha
Helix 72	AH9	C	369	398	Right-handed alpha
Helix 73	AI1	D	2	14	Right-handed alpha
Helix 74	AI2	D	20	34	Right-handed alpha
Helix 75	AI3	D	38	53	Right-handed alpha
Helix 76	AI4	D	58	72	Right-handed alpha
Helix 77	AI5	D	73	76	Right-handed 310
Helix 78	AI6	D	77	93	Right-handed alpha
Helix 79	AI7	D	96	100	Right-handed 310
Helix 80	AI8	D	102	117	Right-handed alpha
Helix 81	AI9	D	119	130	Right-handed alpha
Helix 82	AJ1	D	140	158	Right-handed alpha
Helix 83	AJ2	D	160	175	Right-handed alpha
Helix 84	AJ3	D	176	178	Right-handed 310
Helix 85	AJ4	D	180	198	Right-handed alpha
Helix 86	AJ5	D	201	212	Right-handed alpha
Helix 87	AJ6	D	218	235	Right-handed alpha
Helix 88	AJ7	D	239	252	Right-handed alpha
Helix 89	AJ8	D	253	258	Right-handed alpha
Helix 90	AJ9	D	261	269	Right-handed alpha
Helix 91	AK1	D	278	284	Right-handed alpha
Helix 92	AK2	D	286	291	Right-handed alpha
Helix 93	AK3	D	298	313	Right-handed alpha
Helix 94	AK4	D	321	328	Right-handed alpha
Helix 95	AK5	D	332	343	Right-handed alpha
Helix 96	AK6	D	366	392	Right-handed alpha
Helix 97	AK7	D	392	404	Right-handed alpha
Helix 98	AK8	E	25	30	Right-handed 310
Helix 99	AK9	E	32	43	Right-handed alpha
Helix 100	AL1	E	44	47	Right-handed 310
Helix 101	AL2	E	59	72	Right-handed alpha
Helix 102	AL3	E	111	116	Right-handed alpha
Helix 103	AL4	E	117	128	Right-handed alpha
Helix 104	AL5	E	150	162	Right-handed alpha
Helix 105	AL6	E	171	179	Right-handed alpha
Helix 106	AL7	E	217	219	Right-handed 310
Helix 107	AL8	E	231	240	Right-handed alpha
Helix 108	AL9	E	258	281	Right-handed alpha
Helix 109	AM1	E	299	329	Right-handed alpha
Helix 110	AM2	F	46	63	Right-handed alpha
Helix 111	AM3	F	101	116	Right-handed alpha
Helix 112	AM4	F	132	144	Right-handed alpha
Helix 113	AM5	F	193	206	Right-handed alpha
Helix 114	AM6	F	215	248	Right-handed alpha
Helix 115	AM7	F	255	266	Right-handed alpha
Helix 116	AM8	F	272	313	Right-handed alpha
Helix 117	AM9	G	11	19	Right-handed alpha
Helix 118	AN1	G	24	37	Right-handed alpha
Helix 119	AN2	G	43	48	Right-handed alpha
Helix 120	AN3	G	49	55	Right-handed alpha
Helix 121	AN4	G	60	72	Right-handed alpha
Helix 122	AN5	G	74	81	Right-handed alpha
Helix 123	AN6	G	89	108	Right-handed alpha
Helix 124	AN7	G	113	121	Right-handed alpha
Helix 125	AN8	G	124	138	Right-handed alpha
Helix 126	AN9	G	166	221	Right-handed alpha
Helix 127	AO1	H	12	26	Right-handed alpha
Helix 128	AO2	H	33	47	Right-handed alpha
Helix 129	AO3	H	49	60	Right-handed alpha
Helix 130	AO4	H	61	68	Right-handed alpha
Helix 131	AO5	H	68	84	Right-handed alpha
Helix 132	AO6	H	85	93	Right-handed alpha
Helix 133	AO7	H	102	124	Right-handed alpha
Helix 134	AO8	H	130	138	Right-handed alpha
Helix 135	AO9	H	140	152	Right-handed alpha
Helix 136	AP1	H	196	209	Right-handed alpha
Helix 137	AP2	I	22	34	Right-handed alpha
Helix 138	AP3	I	37	39	Right-handed 310
Helix 139	AP4	J	310	330	Right-handed alpha
Helix 140	AP5	J	337	359	Right-handed alpha
Helix 141	AP6	J	363	379	Right-handed alpha
Helix 142	AP7	J	384	398	Right-handed alpha
Helix 143	AP8	J	404	421	Right-handed alpha
Helix 144	AP9	J	424	438	Right-handed alpha
Helix 145	AQ1	J	448	463	Right-handed alpha
Helix 146	AQ2	J	465	494	Right-handed alpha
Helix 147	AQ3	J	496	501	Right-handed 310
Helix 148	AQ4	J	525	541	Right-handed alpha
Helix 149	AQ5	J	596	608	Right-handed alpha
Helix 150	AQ6	J	613	619	Right-handed alpha
Helix 151	AQ7	J	626	632	Right-handed alpha
Helix 152	AQ8	J	674	680	Right-handed 310
Helix 153	AQ9	J	695	713	Right-handed alpha
Helix 154	AR1	J	720	730	Right-handed alpha
Helix 155	AR2	J	737	748	Right-handed alpha
Helix 156	AR3	J	749	751	Right-handed 310
Helix 157	AR4	K	54	59	Right-handed alpha
Helix 158	AR5	K	81	91	Right-handed alpha

There are 10 sheets in PDB entry 9EGL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	352	353	first strand
Strand 2	B	366	370	parallel
Strand 3	B	408	411	anti-parallel
Strand 4	B	400	403	anti-parallel
Strand 5	A	381	385	parallel
Strand 6	A	423	426	anti-parallel
Strand 7	A	415	418	anti-parallel
Strand 8	C	314	318	parallel
Strand 9	C	357	360	anti-parallel
Strand 10	C	349	352	anti-parallel
Strand 11	H	125	129	parallel
Strand 12	H	161	163	anti-parallel
Strand 13	H	154	156	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	358	360	first strand
Strand 2	D	316	320	anti-parallel
Strand 3	G	141	146	parallel
Strand 4	G	151	157	anti-parallel
Strand 5	G	110	112	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	58	first strand
Strand 2	E	89	94	parallel
Strand 3	E	78	86	anti-parallel
Strand 4	E	132	139	anti-parallel
Strand 5	E	167	170	parallel
Strand 6	E	183	188	anti-parallel
Strand 7	E	221	229	anti-parallel
Strand 8	E	54	58	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	43	first strand
Strand 2	F	80	88	parallel
Strand 3	F	70	77	anti-parallel
Strand 4	F	120	127	anti-parallel
Strand 5	F	150	154	parallel
Strand 6	F	166	172	anti-parallel
Strand 7	F	181	185	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	94	first strand
Strand 2	F	97	100	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	12	15	first strand
Strand 2	I	3	7	anti-parallel
Strand 3	I	66	71	parallel
Strand 4	I	41	44	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	508	509	first strand
Strand 2	K	32	35	parallel
Strand 3	J	546	548	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	557	561	first strand
Strand 2	J	590	594	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	611	612	first strand
Strand 2	J	658	659	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	70	71	first strand
Strand 2	K	79	80	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EGL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EGL