Analysis of interatomic Contacts of Structural Units in PDB entry:
9EID


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EID entry

There is 1 chain in PDB entry 9EID (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2THR 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9EID. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 22Right-handed 310
Helix 2
AA2
A
36 47Right-handed alpha
Helix 3
AA3
A
53 59Right-handed alpha
Helix 4
AA4
A
76 91Right-handed alpha
Helix 5
AA5
A
94 96Right-handed 310
Helix 6
AA6
A
111 120Right-handed alpha
Helix 7
AA7
A
120 127Right-handed alpha
Helix 8
AA8
A
136 138Right-handed 310
Helix 9
AA9
A
156 160Right-handed alpha
Helix 10
AB1
A
180 185Right-handed 310
Helix 11
AB2
A
191 199Right-handed alpha
Helix 12
AB3
A
200 205Right-handed alpha
Helix 13
AB4
A
217 231Right-handed alpha
Helix 14
AB5
A
253 267Right-handed alpha
Helix 15
AB6
A
288 291Right-handed 310
Helix 16
AB7
A
292 304Right-handed alpha
Helix 17
AB8
A
325 335Right-handed alpha
Helix 18
AB9
A
337 346Right-handed alpha
Helix 19
AC1
A
354 367Right-handed alpha
Helix 20
AC2
A
378 384Right-handed alpha
Helix 21
AC3
A
392 405Right-handed alpha
Helix 22
AC4
A
415 419Right-handed 310
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There are 6 sheets in PDB entry 9EID. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
13 16anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 131first strand
Strand 2
A
98 103parallel
Strand 3
A
64 69parallel
Strand 4
A
163 169parallel
Strand 5
A
234 240parallel
Strand 6
A
246 252anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 145first strand
Strand 2
A
151 155anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
177 178anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
420 423parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
368 373parallel
Strand 3
A
307 316parallel
Strand 4
A
277 283parallel
Strand 5
A
410 413parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il