Analysis of interatomic Contacts of Structural Units in PDB entry:
9EIH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EIH entry

There are 26 chains in PDB entry 9EIH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ALA 15	GLN 131
D	ALA 15	SER 130
E	PRO 11	ALA 294
F	CYS 13	ALA 294
G	LEU 77	GLY 361
H	LEU 77	GLY 361
I	LEU 77	GLY 361
J	LEU 77	GLY 361
K	MET 1	LEU 48
L	MET 1	LEU 48
M	MET 1	GLY 55
N	MET 1	GLY 55
O	ASP 26	ASP 64
P	ASP 26	ASP 64
Q	PRO 56	GLN 115
R	GLU 57	GLN 115
S	ASP 68	ARG 117
T	ASP 68	ARG 117
U	ASP 26	MET 68
V	ASP 26	LEU 67
W	SER 5	GLY 55
X	SER 5	GLY 55
Y	GLU 15	LEU 48
Z	GLU 15	LEU 48
A	LEU 63	LEU 581
B	LEU 63	LEU 581

There are105 helices in PDB entry 9EIH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	16	19	Right-handed 310
Helix 2	AA2	C	20	31	Right-handed alpha
Helix 3	AA3	C	31	52	Right-handed alpha
Helix 4	AA4	C	62	83	Right-handed alpha
Helix 5	AA5	C	85	98	Right-handed alpha
Helix 6	AA6	C	102	111	Right-handed alpha
Helix 7	AA7	C	115	130	Right-handed alpha
Helix 8	AA8	D	16	29	Right-handed alpha
Helix 9	AA9	D	32	53	Right-handed alpha
Helix 10	AB1	D	62	83	Right-handed alpha
Helix 11	AB2	D	85	100	Right-handed alpha
Helix 12	AB3	D	102	112	Right-handed alpha
Helix 13	AB4	D	115	126	Right-handed alpha
Helix 14	AB5	D	127	129	Right-handed 310
Helix 15	AB6	E	17	21	Right-handed 310
Helix 16	AB7	E	22	31	Right-handed alpha
Helix 17	AB8	E	278	282	Right-handed 310
Helix 18	AB9	F	17	21	Right-handed 310
Helix 19	AC1	F	22	31	Right-handed alpha
Helix 20	AC2	F	116	119	Right-handed 310
Helix 21	AC3	G	82	86	Right-handed 310
Helix 22	AC4	G	87	92	Right-handed alpha
Helix 23	AC5	G	308	311	Right-handed 310
Helix 24	AC6	H	82	86	Right-handed 310
Helix 25	AC7	H	87	92	Right-handed alpha
Helix 26	AC8	H	308	310	Right-handed 310
Helix 27	AC9	I	82	86	Right-handed 310
Helix 28	AD1	I	87	92	Right-handed alpha
Helix 29	AD2	I	308	310	Right-handed 310
Helix 30	AD3	J	84	92	Right-handed alpha
Helix 31	AD4	J	308	310	Right-handed 310
Helix 32	AD5	K	14	48	Right-handed alpha
Helix 33	AD6	L	14	46	Right-handed alpha
Helix 34	AD7	M	5	38	Right-handed alpha
Helix 35	AD8	M	48	54	Right-handed alpha
Helix 36	AD9	N	5	39	Right-handed alpha
Helix 37	AE1	N	48	54	Right-handed alpha
Helix 38	AE2	O	27	36	Right-handed alpha
Helix 39	AE3	O	40	62	Right-handed alpha
Helix 40	AE4	P	27	36	Right-handed alpha
Helix 41	AE5	P	40	62	Right-handed alpha
Helix 42	AE6	Q	57	61	Right-handed 310
Helix 43	AE7	Q	62	96	Right-handed alpha
Helix 44	AE8	Q	96	113	Right-handed alpha
Helix 45	AE9	R	58	64	Right-handed alpha
Helix 46	AF1	R	66	96	Right-handed alpha
Helix 47	AF2	R	96	114	Right-handed alpha
Helix 48	AF3	S	69	96	Right-handed alpha
Helix 49	AF4	S	96	116	Right-handed alpha
Helix 50	AF5	T	69	96	Right-handed alpha
Helix 51	AF6	T	96	116	Right-handed alpha
Helix 52	AF7	U	27	36	Right-handed alpha
Helix 53	AF8	U	40	62	Right-handed alpha
Helix 54	AF9	V	27	36	Right-handed alpha
Helix 55	AG1	V	40	62	Right-handed alpha
Helix 56	AG2	W	6	38	Right-handed alpha
Helix 57	AG3	W	49	53	Right-handed 310
Helix 58	AG4	X	6	39	Right-handed alpha
Helix 59	AG5	X	48	53	Right-handed 310
Helix 60	AG6	Y	16	46	Right-handed alpha
Helix 61	AG7	Z	16	41	Right-handed alpha
Helix 62	AG8	Z	41	46	Right-handed alpha
Helix 63	AG9	A	63	67	Right-handed 310
Helix 64	AH1	A	70	75	Right-handed 310
Helix 65	AH2	A	76	91	Right-handed alpha
Helix 66	AH3	A	107	136	Right-handed alpha
Helix 67	AH4	A	141	145	Right-handed 310
Helix 68	AH5	A	152	156	Right-handed 310
Helix 69	AH6	A	229	238	Right-handed alpha
Helix 70	AH7	A	245	251	Right-handed 310
Helix 71	AH8	A	325	332	Right-handed alpha
Helix 72	AH9	A	335	357	Right-handed alpha
Helix 73	AI1	A	384	388	Right-handed 310
Helix 74	AI2	A	415	420	Right-handed alpha
Helix 75	AI3	A	433	447	Right-handed alpha
Helix 76	AI4	A	456	460	Right-handed 310
Helix 77	AI5	A	479	490	Right-handed alpha
Helix 78	AI6	A	499	513	Right-handed alpha
Helix 79	AI7	A	513	518	Right-handed alpha
Helix 80	AI8	A	523	544	Right-handed alpha
Helix 81	AI9	A	549	561	Right-handed alpha
Helix 82	AJ1	A	565	579	Right-handed alpha
Helix 83	AJ2	A	580	581	Right-handed 310
Helix 84	AJ3	B	63	67	Right-handed 310
Helix 85	AJ4	B	70	75	Right-handed 310
Helix 86	AJ5	B	76	91	Right-handed alpha
Helix 87	AJ6	B	107	136	Right-handed alpha
Helix 88	AJ7	B	141	145	Right-handed 310
Helix 89	AJ8	B	152	156	Right-handed 310
Helix 90	AJ9	B	229	237	Right-handed alpha
Helix 91	AK1	B	247	251	Right-handed 310
Helix 92	AK2	B	325	332	Right-handed alpha
Helix 93	AK3	B	335	357	Right-handed alpha
Helix 94	AK4	B	384	388	Right-handed 310
Helix 95	AK5	B	415	420	Right-handed alpha
Helix 96	AK6	B	433	447	Right-handed alpha
Helix 97	AK7	B	456	460	Right-handed 310
Helix 98	AK8	B	467	471	Right-handed 310
Helix 99	AK9	B	479	490	Right-handed alpha
Helix 100	AL1	B	493	497	Right-handed 310
Helix 101	AL2	B	499	513	Right-handed alpha
Helix 102	AL3	B	513	518	Right-handed alpha
Helix 103	AL4	B	523	545	Right-handed alpha
Helix 104	AL5	B	549	561	Right-handed alpha
Helix 105	AL6	B	563	579	Right-handed alpha

There are 13 sheets in PDB entry 9EIH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	37	45	first strand
Strand 2	E	51	59	anti-parallel
Strand 3	E	65	72	anti-parallel
Strand 4	E	80	87	anti-parallel
Strand 5	E	91	103	anti-parallel
Strand 6	E	106	114	anti-parallel
Strand 7	E	121	131	anti-parallel
Strand 8	E	134	142	anti-parallel
Strand 9	E	148	155	anti-parallel
Strand 10	E	160	169	anti-parallel
Strand 11	E	175	185	anti-parallel
Strand 12	E	189	196	anti-parallel
Strand 13	E	200	208	anti-parallel
Strand 14	E	213	221	anti-parallel
Strand 15	E	229	239	anti-parallel
Strand 16	E	242	249	anti-parallel
Strand 17	E	253	263	anti-parallel
Strand 18	E	266	275	anti-parallel
Strand 19	E	285	294	anti-parallel
Strand 20	E	37	45	parallel

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There are 20 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	37	45	first strand
Strand 2	F	50	59	anti-parallel
Strand 3	F	65	74	anti-parallel
Strand 4	F	81	87	anti-parallel
Strand 5	F	91	98	anti-parallel
Strand 6	F	106	115	anti-parallel
Strand 7	F	120	131	anti-parallel
Strand 8	F	134	141	anti-parallel
Strand 9	F	148	155	anti-parallel
Strand 10	F	160	169	anti-parallel
Strand 11	F	174	185	anti-parallel
Strand 12	F	189	196	anti-parallel
Strand 13	F	200	210	anti-parallel
Strand 14	F	213	222	anti-parallel
Strand 15	F	228	239	anti-parallel
Strand 16	F	242	249	anti-parallel
Strand 17	F	253	263	anti-parallel
Strand 18	F	266	275	anti-parallel
Strand 19	F	285	292	anti-parallel
Strand 20	F	37	45	parallel

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There are 20 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	110	first strand
Strand 2	G	113	121	anti-parallel
Strand 3	G	128	135	anti-parallel
Strand 4	G	149	155	anti-parallel
Strand 5	G	160	169	anti-parallel
Strand 6	G	172	181	anti-parallel
Strand 7	G	184	195	anti-parallel
Strand 8	G	199	209	anti-parallel
Strand 9	G	214	224	anti-parallel
Strand 10	G	229	240	anti-parallel
Strand 11	G	243	256	anti-parallel
Strand 12	G	259	266	anti-parallel
Strand 13	G	269	276	anti-parallel
Strand 14	G	282	291	anti-parallel
Strand 15	G	297	307	anti-parallel
Strand 16	G	312	319	anti-parallel
Strand 17	G	323	332	anti-parallel
Strand 18	G	337	346	anti-parallel
Strand 19	G	351	360	anti-parallel
Strand 20	G	100	110	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	140	142	first strand
Strand 2	G	145	147	anti-parallel

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There are 20 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	100	110	first strand
Strand 2	H	113	121	anti-parallel
Strand 3	H	128	142	anti-parallel
Strand 4	H	145	155	anti-parallel
Strand 5	H	160	169	anti-parallel
Strand 6	H	172	181	anti-parallel
Strand 7	H	184	195	anti-parallel
Strand 8	H	199	209	anti-parallel
Strand 9	H	214	226	anti-parallel
Strand 10	H	229	240	anti-parallel
Strand 11	H	243	254	anti-parallel
Strand 12	H	259	266	anti-parallel
Strand 13	H	269	276	anti-parallel
Strand 14	H	282	291	anti-parallel
Strand 15	H	296	307	anti-parallel
Strand 16	H	312	319	anti-parallel
Strand 17	H	323	332	anti-parallel
Strand 18	H	337	346	anti-parallel
Strand 19	H	352	360	anti-parallel
Strand 20	H	100	110	parallel

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There are 20 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	100	110	first strand
Strand 2	I	113	121	anti-parallel
Strand 3	I	128	140	anti-parallel
Strand 4	I	146	155	anti-parallel
Strand 5	I	161	167	anti-parallel
Strand 6	I	173	181	anti-parallel
Strand 7	I	184	195	anti-parallel
Strand 8	I	199	206	anti-parallel
Strand 9	I	215	226	anti-parallel
Strand 10	I	229	240	anti-parallel
Strand 11	I	243	256	anti-parallel
Strand 12	I	259	266	anti-parallel
Strand 13	I	269	276	anti-parallel
Strand 14	I	282	291	anti-parallel
Strand 15	I	296	307	anti-parallel
Strand 16	I	312	319	anti-parallel
Strand 17	I	323	331	anti-parallel
Strand 18	I	337	346	anti-parallel
Strand 19	I	351	360	anti-parallel
Strand 20	I	100	110	parallel

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There are 20 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	100	110	first strand
Strand 2	J	113	121	anti-parallel
Strand 3	J	128	140	anti-parallel
Strand 4	J	146	155	anti-parallel
Strand 5	J	160	169	anti-parallel
Strand 6	J	172	181	anti-parallel
Strand 7	J	184	195	anti-parallel
Strand 8	J	199	209	anti-parallel
Strand 9	J	214	226	anti-parallel
Strand 10	J	229	240	anti-parallel
Strand 11	J	243	256	anti-parallel
Strand 12	J	259	266	anti-parallel
Strand 13	J	269	277	anti-parallel
Strand 14	J	282	291	anti-parallel
Strand 15	J	296	307	anti-parallel
Strand 16	J	312	319	anti-parallel
Strand 17	J	323	332	anti-parallel
Strand 18	J	337	346	anti-parallel
Strand 19	J	351	360	anti-parallel
Strand 20	J	100	110	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	165	first strand
Strand 2	A	168	174	anti-parallel
Strand 3	A	216	221	anti-parallel
Strand 4	A	313	319	anti-parallel
Strand 5	A	279	283	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	324	first strand
Strand 2	A	368	372	anti-parallel
Strand 3	A	378	382	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	399	first strand
Strand 2	A	428	430	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	164	first strand
Strand 2	B	168	174	anti-parallel
Strand 3	B	216	221	anti-parallel
Strand 4	B	313	319	anti-parallel
Strand 5	B	279	283	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	323	324	first strand
Strand 2	B	368	372	anti-parallel
Strand 3	B	378	382	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	399	first strand
Strand 2	B	428	430	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EIH

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EIH