Analysis of interatomic Contacts of Structural Units in PDB entry:
9EJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EJ9 entry

There are 2 chains in PDB entry 9EJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 4LYS 890
B
 T 4 A 34
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9EJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 38Right-handed alpha
Helix 2
AA2
A
53 69Right-handed alpha
Helix 3
AA3
A
252 266Right-handed alpha
Helix 4
AA4
A
278 283Right-handed alpha
Helix 5
AA5
A
285 290Right-handed alpha
Helix 6
AA6
A
293 303Right-handed alpha
Helix 7
AA7
A
321 327Right-handed alpha
Helix 8
AA8
A
336 348Right-handed alpha
Helix 9
AA9
A
350 358Right-handed alpha
Helix 10
AB1
A
369 374Right-handed alpha
Helix 11
AB2
A
374 380Right-handed alpha
Helix 12
AB3
A
395 406Right-handed alpha
Helix 13
AB4
A
411 428Right-handed alpha
Helix 14
AB5
A
431 453Right-handed alpha
Helix 15
AB6
A
454 456Right-handed 310
Helix 16
AB7
A
469 481Right-handed alpha
Helix 17
AB8
A
486 499Right-handed alpha
Helix 18
AB9
A
520 543Right-handed alpha
Helix 19
AC1
A
595 605Right-handed alpha
Helix 20
AC2
A
619 628Right-handed alpha
Helix 21
AC3
A
663 668Right-handed alpha
Helix 22
AC4
A
669 687Right-handed alpha
Helix 23
AC5
A
697 710Right-handed alpha
Helix 24
AC6
A
713 719Right-handed alpha
Helix 25
AC7
A
731 748Right-handed alpha
Helix 26
AC8
A
772 776Right-handed 310
Helix 27
AC9
A
791 809Right-handed alpha
Helix 28
AD1
A
812 830Right-handed alpha
Helix 29
AD2
A
847 852Right-handed alpha
Helix 30
AD3
A
852 857Right-handed alpha
Helix 31
AD4
A
861 868Right-handed alpha
Helix 32
AD5
A
873 890Right-handed alpha
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There are 4 sheets in PDB entry 9EJ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
13 17anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
A
364 368parallel
Strand 3
A
246 250parallel
Strand 4
A
389 392parallel
Strand 5
A
609 614parallel
Strand 6
A
42 45parallel
Strand 7
A
633 636parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 410first strand
Strand 2
A
588 593anti-parallel
Strand 3
A
548 553anti-parallel
Strand 4
A
464 468anti-parallel
Strand 5
A
457 458anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
721 725first strand
Strand 2
A
754 760parallel
Strand 3
A
689 695parallel
Strand 4
A
778 782parallel
Strand 5
A
840 845parallel
Strand 6
A
646 651parallel
Strand 7
A
870 871parallel
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