Analysis of interatomic Contacts of Structural Units in PDB entry:
9EJG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EJG entry

There are 5 chains in PDB entry 9EJG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3PRO 182
C
 GLN 0PHE 9
D
 GLU 3PRO 213
E
 GLY 3ALA 255
B
 SER 3SER 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9EJG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 53Right-handed 310
Helix 2
AA2
A
57 79Right-handed alpha
Helix 3
AA3
D
95 99Right-handed 310
Helix 4
AA4
D
177 180Right-handed 310
Helix 5
AA5
E
95 99Right-handed 310
Helix 6
AA6
E
128 132Right-handed 310
Helix 7
AA7
E
143 151Right-handed alpha
Helix 8
AA8
E
210 215Right-handed alpha
Helix 9
AA9
B
51 53Right-handed 310
Helix 10
AB1
B
54 63Right-handed alpha
Helix 11
AB2
B
64 78Right-handed alpha
Helix 12
AB3
B
78 89Right-handed alpha
Helix 13
AB4
B
90 93Right-handed 310
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There are 16 sheets in PDB entry 9EJG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
31 37anti-parallel
Strand 3
A
21 28anti-parallel
Strand 4
A
7 16anti-parallel
Strand 5
B
8 18anti-parallel
Strand 6
B
23 32anti-parallel
Strand 7
B
35 41anti-parallel
Strand 8
B
47 49anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 95first strand
Strand 2
A
105 114anti-parallel
Strand 3
A
147 155anti-parallel
Strand 4
A
134 136anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 95first strand
Strand 2
A
105 114anti-parallel
Strand 3
A
147 155anti-parallel
Strand 4
A
140 141anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
120 125anti-parallel
Strand 3
A
163 168anti-parallel
Strand 4
A
176 180anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 6first strand
Strand 2
D
19 25anti-parallel
Strand 3
D
86 91anti-parallel
Strand 4
D
76 81anti-parallel
Strand 5
D
65 68anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 14first strand
Strand 2
D
118 123parallel
Strand 3
D
100 108anti-parallel
Strand 4
D
38 44anti-parallel
Strand 5
D
50 55anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 14first strand
Strand 2
D
118 123parallel
Strand 3
D
100 108anti-parallel
Strand 4
D
111 114anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
166 168first strand
Strand 2
D
181 190anti-parallel
Strand 3
D
145 150anti-parallel
Strand 4
D
132 138anti-parallel
Strand 5
E
136 141anti-parallel
Strand 6
E
152 162anti-parallel
Strand 7
E
200 209anti-parallel
Strand 8
E
182 184anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
172 176first strand
Strand 2
D
181 190anti-parallel
Strand 3
D
145 150anti-parallel
Strand 4
D
132 138anti-parallel
Strand 5
E
136 141anti-parallel
Strand 6
E
152 162anti-parallel
Strand 7
E
200 209anti-parallel
Strand 8
E
189 190anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 7first strand
Strand 2
E
19 24anti-parallel
Strand 3
E
87 91anti-parallel
Strand 4
E
76 80anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 14first strand
Strand 2
E
121 126parallel
Strand 3
E
100 107anti-parallel
Strand 4
E
38 45anti-parallel
Strand 5
E
49 57anti-parallel
Strand 6
E
64 68anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 14first strand
Strand 2
E
121 126parallel
Strand 3
E
100 107anti-parallel
Strand 4
E
116 117anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
176 178first strand
Strand 2
E
167 173anti-parallel
Strand 3
E
220 226anti-parallel
Strand 4
E
245 251anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 104first strand
Strand 2
B
114 122anti-parallel
Strand 3
B
155 162anti-parallel
Strand 4
B
142 144anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 104first strand
Strand 2
B
114 122anti-parallel
Strand 3
B
155 162anti-parallel
Strand 4
B
148 149anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
128 133anti-parallel
Strand 3
B
170 176anti-parallel
Strand 4
B
184 189anti-parallel
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