Analysis of interatomic Contacts of Structural Units in PDB entry:
9EL5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EL5 entry

There are 2 chains in PDB entry 9EL5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 73HIS 644
P
 G 1 G 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 9EL5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 81Right-handed alpha
Helix 2
AA2
A
92 105Right-handed alpha
Helix 3
AA3
A
116 132Right-handed alpha
Helix 4
AA4
A
143 158Right-handed alpha
Helix 5
AA5
A
161 163Right-handed 310
Helix 6
AA6
A
173 184Right-handed alpha
Helix 7
AA7
A
190 200Right-handed alpha
Helix 8
AA8
A
204 206Right-handed 310
Helix 9
AA9
A
216 219Right-handed 310
Helix 10
AB1
A
223 233Right-handed alpha
Helix 11
AB2
A
251 262Right-handed alpha
Helix 12
AB3
A
274 279Right-handed alpha
Helix 13
AB4
A
294 318Right-handed alpha
Helix 14
AB5
A
325 329Right-handed 310
Helix 15
AB6
A
330 342Right-handed alpha
Helix 16
AB7
A
351 377Right-handed alpha
Helix 17
AB8
A
378 391Right-handed alpha
Helix 18
AB9
A
397 405Right-handed alpha
Helix 19
AC1
A
406 420Right-handed alpha
Helix 20
AC2
A
447 467Right-handed alpha
Helix 21
AC3
A
485 498Right-handed alpha
Helix 22
AC4
A
521 534Right-handed alpha
Helix 23
AC5
A
544 547Right-handed 310
Helix 24
AC6
A
567 575Right-handed alpha
Helix 25
AC7
A
592 614Right-handed alpha
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There are 3 sheets in PDB entry 9EL5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 86first strand
Strand 2
A
636 640parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 168first strand
Strand 2
A
186 189parallel
Strand 3
A
136 140parallel
Strand 4
A
208 214parallel
Strand 5
A
240 244parallel
Strand 6
A
107 110parallel
Strand 7
A
266 269parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 291first strand
Strand 2
A
584 590parallel
Strand 3
A
557 560parallel
Strand 4
A
479 482parallel
Strand 5
A
539 542parallel
Strand 6
A
505 508parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il