Analysis of interatomic Contacts of Structural Units in PDB entry:
9ELF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ELF entry

There are 5 chains in PDB entry 9ELF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 19	ALA 614
C	SER 19	ALA 614
E	THR 24	ASP 1153
F	THR 24	ASP 1153
G	THR 24	ASP 1153

There are135 helices in PDB entry 9ELF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	53	Right-handed alpha
Helix 2	AA2	A	55	81	Right-handed alpha
Helix 3	AA3	A	82	83	Right-handed 310
Helix 4	AA4	A	84	88	Right-handed 310
Helix 5	AA5	A	91	102	Right-handed alpha
Helix 6	AA6	A	103	107	Right-handed 310
Helix 7	AA7	A	109	130	Right-handed alpha
Helix 8	AA8	A	146	155	Right-handed alpha
Helix 9	AA9	A	157	172	Right-handed alpha
Helix 10	AB1	A	172	194	Right-handed alpha
Helix 11	AB2	A	198	205	Right-handed alpha
Helix 12	AB3	A	206	208	Right-handed 310
Helix 13	AB4	A	218	252	Right-handed alpha
Helix 14	AB5	A	265	268	Right-handed 310
Helix 15	AB6	A	293	300	Right-handed alpha
Helix 16	AB7	A	303	319	Right-handed alpha
Helix 17	AB8	A	324	331	Right-handed alpha
Helix 18	AB9	A	365	386	Right-handed alpha
Helix 19	AC1	A	387	388	Right-handed 310
Helix 20	AC2	A	389	393	Right-handed 310
Helix 21	AC3	A	399	414	Right-handed alpha
Helix 22	AC4	A	414	422	Right-handed alpha
Helix 23	AC5	A	431	447	Right-handed alpha
Helix 24	AC6	A	448	466	Right-handed alpha
Helix 25	AC7	A	471	486	Right-handed alpha
Helix 26	AC8	A	499	502	Right-handed 310
Helix 27	AC9	A	503	508	Right-handed alpha
Helix 28	AD1	A	512	534	Right-handed alpha
Helix 29	AD2	A	547	559	Right-handed alpha
Helix 30	AD3	A	560	564	Right-handed 310
Helix 31	AD4	A	565	575	Right-handed alpha
Helix 32	AD5	A	581	588	Right-handed alpha
Helix 33	AD6	A	588	600	Right-handed alpha
Helix 34	AD7	C	20	53	Right-handed alpha
Helix 35	AD8	C	55	81	Right-handed alpha
Helix 36	AD9	C	82	83	Right-handed 310
Helix 37	AE1	C	84	88	Right-handed 310
Helix 38	AE2	C	90	102	Right-handed alpha
Helix 39	AE3	C	103	107	Right-handed 310
Helix 40	AE4	C	109	130	Right-handed alpha
Helix 41	AE5	C	146	154	Right-handed alpha
Helix 42	AE6	C	157	194	Right-handed alpha
Helix 43	AE7	C	198	208	Right-handed alpha
Helix 44	AE8	C	218	252	Right-handed alpha
Helix 45	AE9	C	265	268	Right-handed 310
Helix 46	AF1	C	275	277	Right-handed 310
Helix 47	AF2	C	278	283	Right-handed alpha
Helix 48	AF3	C	293	301	Right-handed alpha
Helix 49	AF4	C	303	319	Right-handed alpha
Helix 50	AF5	C	324	331	Right-handed alpha
Helix 51	AF6	C	365	386	Right-handed alpha
Helix 52	AF7	C	387	388	Right-handed 310
Helix 53	AF8	C	389	393	Right-handed 310
Helix 54	AF9	C	397	414	Right-handed alpha
Helix 55	AG1	C	414	422	Right-handed alpha
Helix 56	AG2	C	431	447	Right-handed alpha
Helix 57	AG3	C	448	466	Right-handed alpha
Helix 58	AG4	C	469	471	Right-handed 310
Helix 59	AG5	C	472	485	Right-handed alpha
Helix 60	AG6	C	499	502	Right-handed 310
Helix 61	AG7	C	503	508	Right-handed alpha
Helix 62	AG8	C	512	534	Right-handed alpha
Helix 63	AG9	C	547	560	Right-handed alpha
Helix 64	AH1	C	565	575	Right-handed alpha
Helix 65	AH2	C	581	600	Right-handed alpha
Helix 66	AH3	E	294	304	Right-handed alpha
Helix 67	AH4	E	338	343	Right-handed alpha
Helix 68	AH5	E	365	370	Right-handed alpha
Helix 69	AH6	E	404	408	Right-handed alpha
Helix 70	AH7	E	416	422	Right-handed alpha
Helix 71	AH8	E	438	443	Right-handed alpha
Helix 72	AH9	E	616	626	Right-handed alpha
Helix 73	AI1	E	737	744	Right-handed alpha
Helix 74	AI2	E	746	754	Right-handed alpha
Helix 75	AI3	E	755	757	Right-handed 310
Helix 76	AI4	E	758	783	Right-handed alpha
Helix 77	AI5	E	816	826	Right-handed alpha
Helix 78	AI6	E	866	885	Right-handed alpha
Helix 79	AI7	E	886	891	Right-handed alpha
Helix 80	AI8	E	897	909	Right-handed alpha
Helix 81	AI9	E	912	919	Right-handed alpha
Helix 82	AJ1	E	919	941	Right-handed alpha
Helix 83	AJ2	E	942	944	Right-handed 310
Helix 84	AJ3	E	945	965	Right-handed alpha
Helix 85	AJ4	E	966	968	Right-handed 310
Helix 86	AJ5	E	976	984	Right-handed alpha
Helix 87	AJ6	E	985	1033	Right-handed alpha
Helix 88	AJ7	E	1139	1148	Right-handed alpha
Helix 89	AJ8	F	69	72	Right-handed 310
Helix 90	AJ9	F	294	304	Right-handed alpha
Helix 91	AK1	F	338	343	Right-handed alpha
Helix 92	AK2	F	349	353	Right-handed 310
Helix 93	AK3	F	365	372	Right-handed alpha
Helix 94	AK4	F	404	408	Right-handed alpha
Helix 95	AK5	F	416	422	Right-handed alpha
Helix 96	AK6	F	438	443	Right-handed alpha
Helix 97	AK7	F	616	626	Right-handed alpha
Helix 98	AK8	F	737	743	Right-handed alpha
Helix 99	AK9	F	746	754	Right-handed alpha
Helix 100	AL1	F	755	757	Right-handed 310
Helix 101	AL2	F	758	783	Right-handed alpha
Helix 102	AL3	F	816	826	Right-handed alpha
Helix 103	AL4	F	866	885	Right-handed alpha
Helix 104	AL5	F	886	890	Right-handed 310
Helix 105	AL6	F	897	909	Right-handed alpha
Helix 106	AL7	F	912	919	Right-handed alpha
Helix 107	AL8	F	919	941	Right-handed alpha
Helix 108	AL9	F	942	944	Right-handed 310
Helix 109	AM1	F	945	965	Right-handed alpha
Helix 110	AM2	F	976	984	Right-handed alpha
Helix 111	AM3	F	985	1033	Right-handed alpha
Helix 112	AM4	F	1139	1147	Right-handed alpha
Helix 113	AM5	G	294	304	Right-handed alpha
Helix 114	AM6	G	337	344	Right-handed alpha
Helix 115	AM7	G	365	371	Right-handed 310
Helix 116	AM8	G	405	410	Right-handed 310
Helix 117	AM9	G	417	422	Right-handed alpha
Helix 118	AN1	G	438	443	Right-handed alpha
Helix 119	AN2	G	616	626	Right-handed alpha
Helix 120	AN3	G	737	744	Right-handed alpha
Helix 121	AN4	G	746	754	Right-handed alpha
Helix 122	AN5	G	755	757	Right-handed 310
Helix 123	AN6	G	758	783	Right-handed alpha
Helix 124	AN7	G	816	826	Right-handed alpha
Helix 125	AN8	G	866	885	Right-handed alpha
Helix 126	AN9	G	886	891	Right-handed alpha
Helix 127	AO1	G	897	909	Right-handed alpha
Helix 128	AO2	G	912	919	Right-handed alpha
Helix 129	AO3	G	919	941	Right-handed alpha
Helix 130	AO4	G	942	944	Right-handed 310
Helix 131	AO5	G	945	965	Right-handed alpha
Helix 132	AO6	G	966	968	Right-handed 310
Helix 133	AO7	G	976	984	Right-handed alpha
Helix 134	AO8	G	985	1033	Right-handed alpha
Helix 135	AO9	G	1139	1149	Right-handed alpha

There are 44 sheets in PDB entry 9ELF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	487	488	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	352	first strand
Strand 2	A	355	359	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	359	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	32	first strand
Strand 2	E	60	65	anti-parallel
Strand 3	E	265	269	anti-parallel
Strand 4	E	90	93	anti-parallel
Strand 5	E	191	197	anti-parallel
Strand 6	E	200	206	anti-parallel
Strand 7	E	224	229	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	43	first strand
Strand 2	F	565	567	parallel
Strand 3	F	573	577	anti-parallel
Strand 4	F	584	588	anti-parallel
Strand 5	F	546	554	anti-parallel
Strand 6	F	538	543	anti-parallel
Strand 7	F	325	328	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	55	first strand
Strand 2	E	271	279	anti-parallel
Strand 3	E	285	290	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	85	first strand
Strand 2	E	237	242	anti-parallel
Strand 3	E	101	107	anti-parallel
Strand 4	E	116	121	anti-parallel
Strand 5	E	126	132	anti-parallel
Strand 6	E	164	172	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	311	319	first strand
Strand 2	E	592	599	anti-parallel
Strand 3	E	609	613	anti-parallel
Strand 4	E	648	651	anti-parallel
Strand 5	E	642	644	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	325	328	first strand
Strand 2	E	538	543	parallel
Strand 3	E	546	554	anti-parallel
Strand 4	E	584	588	anti-parallel
Strand 5	E	573	577	anti-parallel
Strand 6	E	565	567	anti-parallel
Strand 7	G	42	43	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	354	359	first strand
Strand 2	E	394	403	anti-parallel
Strand 3	E	507	515	anti-parallel
Strand 4	E	431	437	anti-parallel
Strand 5	E	376	379	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	452	454	first strand
Strand 2	E	492	494	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	473	474	first strand
Strand 2	E	488	489	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	654	655	first strand
Strand 2	E	690	696	parallel
Strand 3	E	670	676	anti-parallel
Strand 4	E	664	667	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	701	704	first strand
Strand 2	G	787	790	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	728	first strand
Strand 2	E	1059	1077	anti-parallel
Strand 3	E	1047	1056	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	728	first strand
Strand 2	E	1059	1077	anti-parallel
Strand 3	E	1094	1097	anti-parallel
Strand 4	E	1102	1106	anti-parallel
Strand 5	E	1109	1114	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	733	736	first strand
Strand 2	E	858	861	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	787	790	first strand
Strand 2	F	701	704	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1120	1125	first strand
Strand 2	E	1086	1090	anti-parallel
Strand 3	E	1081	1082	anti-parallel
Strand 4	E	1133	1134	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	32	first strand
Strand 2	F	60	64	anti-parallel
Strand 3	F	265	269	anti-parallel
Strand 4	F	90	94	anti-parallel
Strand 5	F	191	197	anti-parallel
Strand 6	F	200	206	anti-parallel
Strand 7	F	224	229	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	42	43	first strand
Strand 2	G	565	567	parallel
Strand 3	G	573	577	anti-parallel
Strand 4	G	584	588	anti-parallel
Strand 5	G	546	554	anti-parallel
Strand 6	G	538	543	anti-parallel
Strand 7	G	325	328	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	55	first strand
Strand 2	F	271	279	anti-parallel
Strand 3	F	285	290	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	163	172	first strand
Strand 2	F	126	133	anti-parallel
Strand 3	F	116	121	anti-parallel
Strand 4	F	101	107	anti-parallel
Strand 5	F	237	242	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	311	319	first strand
Strand 2	F	592	599	anti-parallel
Strand 3	F	609	613	anti-parallel
Strand 4	F	648	651	anti-parallel
Strand 5	F	642	644	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	354	358	first strand
Strand 2	F	395	403	anti-parallel
Strand 3	F	507	514	anti-parallel
Strand 4	F	431	437	anti-parallel
Strand 5	F	376	379	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	654	655	first strand
Strand 2	F	690	696	parallel
Strand 3	F	670	676	anti-parallel
Strand 4	F	664	667	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	711	728	first strand
Strand 2	F	1059	1077	anti-parallel
Strand 3	F	1047	1056	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	711	728	first strand
Strand 2	F	1059	1077	anti-parallel
Strand 3	F	1094	1097	anti-parallel
Strand 4	F	1102	1106	anti-parallel
Strand 5	F	1109	1113	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	733	736	first strand
Strand 2	F	858	861	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	787	790	first strand
Strand 2	G	701	704	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1120	1125	first strand
Strand 2	F	1086	1090	anti-parallel
Strand 3	F	1081	1082	anti-parallel
Strand 4	F	1133	1134	parallel

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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	26	32	first strand
Strand 2	G	60	65	anti-parallel
Strand 3	G	265	269	anti-parallel
Strand 4	G	90	93	anti-parallel
Strand 5	G	191	197	anti-parallel
Strand 6	G	200	206	anti-parallel
Strand 7	G	224	229	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	48	55	first strand
Strand 2	G	271	279	anti-parallel
Strand 3	G	285	290	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	163	172	first strand
Strand 2	G	126	133	anti-parallel
Strand 3	G	116	121	anti-parallel
Strand 4	G	101	107	anti-parallel
Strand 5	G	237	242	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	311	319	first strand
Strand 2	G	592	599	anti-parallel
Strand 3	G	609	613	anti-parallel
Strand 4	G	648	651	anti-parallel
Strand 5	G	642	644	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	354	359	first strand
Strand 2	G	393	403	anti-parallel
Strand 3	G	507	517	anti-parallel
Strand 4	G	431	437	anti-parallel
Strand 5	G	376	379	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	452	454	first strand
Strand 2	G	492	494	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	473	474	first strand
Strand 2	G	488	489	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	654	655	first strand
Strand 2	G	690	696	parallel
Strand 3	G	670	676	anti-parallel
Strand 4	G	664	667	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	711	714	first strand
Strand 2	G	1073	1078	anti-parallel
Strand 3	G	1094	1097	anti-parallel
Strand 4	G	1102	1105	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	717	728	first strand
Strand 2	G	1059	1070	anti-parallel
Strand 3	G	1047	1056	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	733	736	first strand
Strand 2	G	858	861	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1120	1125	first strand
Strand 2	G	1086	1090	anti-parallel
Strand 3	G	1081	1082	anti-parallel
Strand 4	G	1133	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ELF

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ELF