Analysis of interatomic Contacts of Structural Units in PDB entry:
9ENE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ENE entry

There are 4 chains in PDB entry 9ENE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 52GLY 422
B
 LYS 52GLY 422
C
 G 1 G 73
D
 G 1 G 73
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 9ENE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 60Right-handed 310
Helix 2
AA2
A
89 100Right-handed alpha
Helix 3
AA3
A
105 110Right-handed 310
Helix 4
AA4
A
159 168Right-handed alpha
Helix 5
AA5
A
205 213Right-handed alpha
Helix 6
AA6
A
214 217Right-handed 310
Helix 7
AA7
A
229 233Right-handed 310
Helix 8
AA8
A
259 263Right-handed 310
Helix 9
AA9
A
277 291Right-handed alpha
Helix 10
AB1
A
297 304Right-handed alpha
Helix 11
AB2
A
338 370Right-handed alpha
Helix 12
AB3
A
413 417Right-handed 310
Helix 13
AB4
B
56 60Right-handed 310
Helix 14
AB5
B
73 76Right-handed 310
Helix 15
AB6
B
88 100Right-handed alpha
Helix 16
AB7
B
106 110Right-handed 310
Helix 17
AB8
B
159 166Right-handed alpha
Helix 18
AB9
B
205 213Right-handed alpha
Helix 19
AC1
B
214 217Right-handed 310
Helix 20
AC2
B
277 291Right-handed alpha
Helix 21
AC3
B
297 303Right-handed alpha
Helix 22
AC4
B
338 368Right-handed alpha
Helix 23
AC5
B
369 372Right-handed 310
Helix 24
AC6
B
398 402Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 9ENE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
128 134anti-parallel
Strand 3
A
61 66anti-parallel
Strand 4
A
178 179anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
69 71anti-parallel
Strand 3
A
122 126anti-parallel
Strand 4
A
322 328parallel
Strand 5
A
192 199anti-parallel
Strand 6
A
265 271anti-parallel
Strand 7
A
238 248anti-parallel
Strand 8
A
218 221anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 113first strand
Strand 2
B
128 134anti-parallel
Strand 3
B
61 66anti-parallel
Strand 4
B
178 179anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
69 71anti-parallel
Strand 3
B
122 126anti-parallel
Strand 4
B
322 328parallel
Strand 5
B
192 199anti-parallel
Strand 6
B
265 271anti-parallel
Strand 7
B
238 248anti-parallel
Strand 8
B
218 221anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il