Analysis of interatomic Contacts of Structural Units in PDB entry:
9EO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EO1 entry

There are 4 chains in PDB entry 9EO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 372VAL 1007
B
 C 1 G 32
C
 G 4 T 17
D
 T 5 A 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9EO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
373 389Right-handed alpha
Helix 2
AA2
A
389 396Right-handed alpha
Helix 3
AA3
A
397 409Right-handed alpha
Helix 4
AA4
A
411 424Right-handed alpha
Helix 5
AA5
A
443 453Right-handed alpha
Helix 6
AA6
A
458 462Right-handed 310
Helix 7
AA7
A
464 472Right-handed alpha
Helix 8
AA8
A
473 484Right-handed alpha
Helix 9
AA9
A
492 506Right-handed alpha
Helix 10
AB1
A
520 532Right-handed alpha
Helix 11
AB2
A
538 555Right-handed alpha
Helix 12
AB3
A
598 622Right-handed alpha
Helix 13
AB4
A
624 640Right-handed alpha
Helix 14
AB5
A
645 652Right-handed alpha
Helix 15
AB6
A
654 659Right-handed alpha
Helix 16
AB7
A
661 680Right-handed alpha
Helix 17
AB8
A
682 694Right-handed alpha
Helix 18
AB9
A
703 718Right-handed alpha
Helix 19
AC1
A
722 735Right-handed alpha
Helix 20
AC2
A
740 755Right-handed alpha
Helix 21
AC3
A
814 825Right-handed alpha
Helix 22
AC4
A
835 851Right-handed alpha
Helix 23
AC5
A
873 879Right-handed alpha
Helix 24
AC6
A
879 892Right-handed alpha
Helix 25
AC7
A
894 910Right-handed alpha
Helix 26
AC8
A
924 936Right-handed alpha
Helix 27
AC9
A
936 950Right-handed alpha
Helix 28
AD1
A
950 956Right-handed alpha
Helix 29
AD2
A
984 997Right-handed alpha
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There are 2 sheets in PDB entry 9EO1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 430first strand
Strand 2
A
534 537anti-parallel
Strand 3
A
456 457anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
778 783first strand
Strand 2
A
1000 1007parallel
Strand 3
A
970 976parallel
Strand 4
A
961 965anti-parallel
Strand 5
A
829 832anti-parallel
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