Analysis of interatomic Contacts of Structural Units in PDB entry:
9EOA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9EOA entry

There are 7 chains in PDB entry 9EOA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 372	VAL 1007
B	T 1	G 30
C	C -3	T 17
D	T 5	C 16
F	MET 1	GLU 256
G	MET 1	PRO 253
H	MET 1	LYS 254

There are 47 helices in PDB entry 9EOA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	373	389	Right-handed alpha
Helix 2	AA2	A	389	396	Right-handed alpha
Helix 3	AA3	A	397	409	Right-handed alpha
Helix 4	AA4	A	411	424	Right-handed alpha
Helix 5	AA5	A	443	453	Right-handed alpha
Helix 6	AA6	A	458	462	Right-handed 310
Helix 7	AA7	A	464	472	Right-handed alpha
Helix 8	AA8	A	473	484	Right-handed alpha
Helix 9	AA9	A	492	505	Right-handed alpha
Helix 10	AB1	A	519	532	Right-handed alpha
Helix 11	AB2	A	538	556	Right-handed alpha
Helix 12	AB3	A	572	577	Right-handed alpha
Helix 13	AB4	A	598	622	Right-handed alpha
Helix 14	AB5	A	623	641	Right-handed alpha
Helix 15	AB6	A	644	651	Right-handed alpha
Helix 16	AB7	A	654	659	Right-handed alpha
Helix 17	AB8	A	661	680	Right-handed alpha
Helix 18	AB9	A	683	695	Right-handed alpha
Helix 19	AC1	A	703	718	Right-handed alpha
Helix 20	AC2	A	722	735	Right-handed alpha
Helix 21	AC3	A	741	756	Right-handed alpha
Helix 22	AC4	A	757	760	Right-handed 310
Helix 23	AC5	A	813	825	Right-handed alpha
Helix 24	AC6	A	835	851	Right-handed alpha
Helix 25	AC7	A	873	879	Right-handed alpha
Helix 26	AC8	A	879	892	Right-handed alpha
Helix 27	AC9	A	894	909	Right-handed alpha
Helix 28	AD1	A	918	922	Right-handed 310
Helix 29	AD2	A	924	936	Right-handed alpha
Helix 30	AD3	A	936	949	Right-handed alpha
Helix 31	AD4	A	950	955	Right-handed alpha
Helix 32	AD5	A	984	997	Right-handed alpha
Helix 33	AD6	F	8	21	Right-handed alpha
Helix 34	AD7	F	72	82	Right-handed alpha
Helix 35	AD8	F	141	155	Right-handed alpha
Helix 36	AD9	F	209	216	Right-handed alpha
Helix 37	AE1	F	217	219	Right-handed 310
Helix 38	AE2	G	8	21	Right-handed alpha
Helix 39	AE3	G	71	80	Right-handed alpha
Helix 40	AE4	G	141	155	Right-handed alpha
Helix 41	AE5	G	209	216	Right-handed alpha
Helix 42	AE6	G	217	219	Right-handed 310
Helix 43	AE7	H	9	23	Right-handed alpha
Helix 44	AE8	H	72	81	Right-handed alpha
Helix 45	AE9	H	141	155	Right-handed alpha
Helix 46	AF1	H	209	217	Right-handed alpha
Helix 47	AF2	H	218	222	Right-handed 310

There are 12 sheets in PDB entry 9EOA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	430	first strand
Strand 2	A	534	537	anti-parallel
Strand 3	A	456	457	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	783	first strand
Strand 2	A	1001	1007	parallel
Strand 3	A	970	977	parallel
Strand 4	A	961	965	anti-parallel
Strand 5	A	829	832	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	62	first strand
Strand 2	F	2	6	anti-parallel
Strand 3	F	87	91	anti-parallel
Strand 4	F	100	104	anti-parallel
Strand 5	F	110	115	anti-parallel
Strand 6	G	176	183	anti-parallel
Strand 7	G	166	173	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	25	27	first strand
Strand 2	F	69	71	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	30	first strand
Strand 2	F	34	36	anti-parallel
Strand 3	F	46	53	anti-parallel
Strand 4	F	39	40	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	30	first strand
Strand 2	F	34	36	anti-parallel
Strand 3	F	46	53	anti-parallel
Strand 4	F	245	251	anti-parallel
Strand 5	F	233	241	anti-parallel
Strand 6	F	224	230	anti-parallel
Strand 7	F	136	140	anti-parallel
Strand 8	F	197	198	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	203	208	first strand
Strand 2	F	157	162	anti-parallel
Strand 3	F	166	172	anti-parallel
Strand 4	F	176	183	anti-parallel
Strand 5	H	110	117	anti-parallel
Strand 6	H	98	104	anti-parallel
Strand 7	H	87	92	anti-parallel
Strand 8	H	2	6	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	62	first strand
Strand 2	G	2	6	anti-parallel
Strand 3	G	87	92	anti-parallel
Strand 4	G	99	104	anti-parallel
Strand 5	G	110	116	anti-parallel
Strand 6	H	176	182	anti-parallel
Strand 7	H	168	172	anti-parallel
Strand 8	H	157	161	anti-parallel
Strand 9	H	204	208	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	35	40	first strand
Strand 2	G	46	52	anti-parallel
Strand 3	G	245	251	anti-parallel
Strand 4	G	233	241	anti-parallel
Strand 5	G	224	230	anti-parallel
Strand 6	G	135	140	anti-parallel
Strand 7	G	196	199	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	157	159	first strand
Strand 2	G	206	208	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	27	first strand
Strand 2	H	69	71	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	31	first strand
Strand 2	H	34	40	anti-parallel
Strand 3	H	46	53	anti-parallel
Strand 4	H	245	251	anti-parallel
Strand 5	H	233	241	anti-parallel
Strand 6	H	224	230	anti-parallel
Strand 7	H	135	140	anti-parallel
Strand 8	H	196	197	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9EOA

Analysis of interatomic Contacts of Structural Units in PDB entry:
9EOA