Analysis of interatomic Contacts of Structural Units in PDB entry:
9EP4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9EP4 entry

There are 3 chains in PDB entry 9EP4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 22PHE 995
B
ALA 28PRO 1009
D
MET 1SER 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 9EP4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
23 30Right-handed alpha
Helix 2
AA2
A
32 37Right-handed alpha
Helix 3
AA3
A
48 59Right-handed alpha
Helix 4
AA4
A
76 92Right-handed alpha
Helix 5
AA5
A
95 103Right-handed alpha
Helix 6
AA6
A
104 120Right-handed alpha
Helix 7
AA7
A
127 131Right-handed alpha
Helix 8
AA8
A
136 159Right-handed alpha
Helix 9
AA9
A
177 194Right-handed alpha
Helix 10
AB1
A
194 208Right-handed alpha
Helix 11
AB2
A
244 264Right-handed alpha
Helix 12
AB3
A
267 289Right-handed alpha
Helix 13
AB4
A
298 313Right-handed alpha
Helix 14
AB5
A
324 336Right-handed alpha
Helix 15
AB6
A
337 352Right-handed alpha
Helix 16
AB7
A
355 373Right-handed alpha
Helix 17
AB8
A
376 395Right-handed alpha
Helix 18
AB9
A
400 407Right-handed alpha
Helix 19
AC1
A
411 427Right-handed alpha
Helix 20
AC2
A
431 449Right-handed alpha
Helix 21
AC3
A
452 462Right-handed alpha
Helix 22
AC4
A
462 469Right-handed alpha
Helix 23
AC5
A
472 483Right-handed alpha
Helix 24
AC6
A
504 519Right-handed alpha
Helix 25
AC7
A
521 536Right-handed alpha
Helix 26
AC8
A
551 559Right-handed alpha
Helix 27
AC9
A
563 583Right-handed alpha
Helix 28
AD1
A
585 601Right-handed alpha
Helix 29
AD2
A
604 626Right-handed alpha
Helix 30
AD3
A
636 647Right-handed alpha
Helix 31
AD4
A
656 670Right-handed alpha
Helix 32
AD5
A
672 678Right-handed alpha
Helix 33
AD6
A
681 688Right-handed alpha
Helix 34
AD7
A
688 703Right-handed alpha
Helix 35
AD8
A
710 725Right-handed alpha
Helix 36
AD9
A
740 745Right-handed alpha
Helix 37
AE1
A
753 763Right-handed alpha
Helix 38
AE2
A
766 783Right-handed alpha
Helix 39
AE3
A
810 829Right-handed alpha
Helix 40
AE4
A
832 846Right-handed alpha
Helix 41
AE5
A
848 864Right-handed alpha
Helix 42
AE6
A
877 891Right-handed alpha
Helix 43
AE7
A
893 902Right-handed alpha
Helix 44
AE8
A
908 917Right-handed alpha
Helix 45
AE9
A
926 932Right-handed 310
Helix 46
AF1
A
934 949Right-handed alpha
Helix 47
AF2
A
950 962Right-handed alpha
Helix 48
AF3
A
973 995Right-handed alpha
Helix 49
AF4
B
29 40Right-handed alpha
Helix 50
AF5
B
53 66Right-handed alpha
Helix 51
AF6
B
69 94Right-handed alpha
Helix 52
AF7
B
118 136Right-handed alpha
Helix 53
AF8
B
136 158Right-handed alpha
Helix 54
AF9
B
174 182Right-handed alpha
Helix 55
AG1
B
183 201Right-handed alpha
Helix 56
AG2
B
205 220Right-handed alpha
Helix 57
AG3
B
223 234Right-handed alpha
Helix 58
AG4
B
234 253Right-handed alpha
Helix 59
AG5
B
291 321Right-handed alpha
Helix 60
AG6
B
336 348Right-handed alpha
Helix 61
AG7
B
348 364Right-handed alpha
Helix 62
AG8
B
365 377Right-handed alpha
Helix 63
AG9
B
380 398Right-handed alpha
Helix 64
AH1
B
402 413Right-handed alpha
Helix 65
AH2
B
429 451Right-handed alpha
Helix 66
AH3
B
471 476Right-handed alpha
Helix 67
AH4
B
480 490Right-handed alpha
Helix 68
AH5
B
494 510Right-handed alpha
Helix 69
AH6
B
514 526Right-handed alpha
Helix 70
AH7
B
528 543Right-handed alpha
Helix 71
AH8
B
548 562Right-handed alpha
Helix 72
AH9
B
567 587Right-handed alpha
Helix 73
AI1
B
590 596Right-handed alpha
Helix 74
AI2
B
598 605Right-handed alpha
Helix 75
AI3
B
606 611Right-handed alpha
Helix 76
AI4
B
612 616Right-handed 310
Helix 77
AI5
B
618 632Right-handed alpha
Helix 78
AI6
B
640 663Right-handed alpha
Helix 79
AI7
B
664 666Right-handed 310
Helix 80
AI8
B
667 679Right-handed alpha
Helix 81
AI9
B
681 698Right-handed alpha
Helix 82
AJ1
B
702 706Right-handed 310
Helix 83
AJ2
B
768 788Right-handed alpha
Helix 84
AJ3
B
805 821Right-handed alpha
Helix 85
AJ4
B
833 839Right-handed 310
Helix 86
AJ5
B
840 854Right-handed alpha
Helix 87
AJ6
B
855 867Right-handed alpha
Helix 88
AJ7
B
868 873Right-handed 310
Helix 89
AJ8
B
874 892Right-handed alpha
Helix 90
AJ9
B
900 917Right-handed alpha
Helix 91
AK1
B
921 926Right-handed alpha
Helix 92
AK2
B
927 934Right-handed 310
Helix 93
AK3
B
935 953Right-handed alpha
Helix 94
AK4
B
956 958Right-handed 310
Helix 95
AK5
B
972 977Right-handed alpha
Helix 96
AK6
B
983 995Right-handed alpha
Helix 97
AK7
B
995 1000Right-handed alpha
Helix 98
AK8
B
1001 1006Right-handed 310
Helix 99
AK9
D
2 10Right-handed alpha
Helix 100
AL1
D
12 35Right-handed alpha
Helix 101
AL2
D
41 52Right-handed alpha
Helix 102
AL3
D
67 85Right-handed alpha
Helix 103
AL4
D
87 100Right-handed alpha
Helix 104
AL5
D
106 125Right-handed alpha
Helix 105
AL6
D
126 140Right-handed alpha
Helix 106
AL7
D
141 158Right-handed alpha
Helix 107
AL8
D
163 170Right-handed alpha
Helix 108
AL9
D
174 189Right-handed alpha
Helix 109
AM1
D
193 197Right-handed 310
Helix 110
AM2
D
199 213Right-handed alpha
Helix 111
AM3
D
214 217Right-handed 310
Helix 112
AM4
D
218 224Right-handed alpha
Helix 113
AM5
D
239 257Right-handed alpha
Helix 114
AM6
D
277 308Right-handed alpha
Helix 115
AM7
D
318 337Right-handed alpha
Helix 116
AM8
D
338 340Right-handed 310
Helix 117
AM9
D
341 362Right-handed alpha
Helix 118
AN1
D
368 376Right-handed alpha
Helix 119
AN2
D
377 379Right-handed 310
Helix 120
AN3
D
382 390Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9EP4.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
960 963first strand
Strand 2
B
968 971anti-parallel
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