Analysis of interatomic Contacts of Structural Units in PDB entry:
9ES7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ES7 entry

There are 18 chains in PDB entry 9ES7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LEU 215
B	GLY 2	PHE 160
C	TYR 1	PHE 285
D	ASN 8	ALA 179
E	MET 1	ILE 31
F	ASN 1	ALA 37
G	MET 1	GLN 34
H	MET 1	LEU 29
I	SER 2	LEU 215
J	GLY 2	PHE 160
K	TYR 1	PHE 285
L	ASN 8	ALA 179
M	MET 1	ILE 31
N	ASN 1	ALA 37
O	MET 1	GLN 34
P	MET 1	LEU 29
Q	LYS 32	GLY 57
R	LYS 32	GLY 57

There are 72 helices in PDB entry 9ES7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	13	Right-handed alpha
Helix 2	AA2	A	14	22	Right-handed alpha
Helix 3	AA3	A	31	34	Right-handed 310
Helix 4	AA4	A	35	55	Right-handed alpha
Helix 5	AA5	A	64	75	Right-handed alpha
Helix 6	AA6	A	78	107	Right-handed alpha
Helix 7	AA7	A	114	136	Right-handed alpha
Helix 8	AA8	A	141	154	Right-handed alpha
Helix 9	AA9	A	155	158	Right-handed 310
Helix 10	AB1	A	161	171	Right-handed alpha
Helix 11	AB2	A	176	189	Right-handed alpha
Helix 12	AB3	A	189	210	Right-handed alpha
Helix 13	AB4	B	11	20	Right-handed alpha
Helix 14	AB5	B	39	58	Right-handed alpha
Helix 15	AB6	B	78	80	Right-handed 310
Helix 16	AB7	B	81	91	Right-handed alpha
Helix 17	AB8	B	93	110	Right-handed alpha
Helix 18	AB9	B	110	115	Right-handed alpha
Helix 19	AC1	B	122	125	Right-handed 310
Helix 20	AC2	B	126	147	Right-handed alpha
Helix 21	AC3	B	148	149	Right-handed 310
Helix 22	AC4	B	150	154	Right-handed 310
Helix 23	AC5	C	2	9	Right-handed alpha
Helix 24	AC6	C	19	24	Right-handed 310
Helix 25	AC7	C	85	89	Right-handed 310
Helix 26	AC8	C	90	98	Right-handed alpha
Helix 27	AC9	C	247	283	Right-handed alpha
Helix 28	AD1	D	11	40	Right-handed alpha
Helix 29	AD2	D	64	72	Right-handed alpha
Helix 30	AD3	D	83	85	Right-handed 310
Helix 31	AD4	E	2	28	Right-handed alpha
Helix 32	AD5	F	2	37	Right-handed alpha
Helix 33	AD6	G	3	33	Right-handed alpha
Helix 34	AD7	H	2	27	Right-handed alpha
Helix 35	AD8	I	3	13	Right-handed alpha
Helix 36	AD9	I	14	22	Right-handed alpha
Helix 37	AE1	I	31	34	Right-handed 310
Helix 38	AE2	I	35	55	Right-handed alpha
Helix 39	AE3	I	64	75	Right-handed alpha
Helix 40	AE4	I	78	107	Right-handed alpha
Helix 41	AE5	I	114	136	Right-handed alpha
Helix 42	AE6	I	141	154	Right-handed alpha
Helix 43	AE7	I	155	158	Right-handed 310
Helix 44	AE8	I	161	171	Right-handed alpha
Helix 45	AE9	I	176	189	Right-handed alpha
Helix 46	AF1	I	189	210	Right-handed alpha
Helix 47	AF2	J	11	20	Right-handed alpha
Helix 48	AF3	J	39	58	Right-handed alpha
Helix 49	AF4	J	78	80	Right-handed 310
Helix 50	AF5	J	81	91	Right-handed alpha
Helix 51	AF6	J	93	110	Right-handed alpha
Helix 52	AF7	J	110	115	Right-handed alpha
Helix 53	AF8	J	122	125	Right-handed 310
Helix 54	AF9	J	126	147	Right-handed alpha
Helix 55	AG1	J	148	149	Right-handed 310
Helix 56	AG2	J	150	154	Right-handed 310
Helix 57	AG3	K	2	9	Right-handed alpha
Helix 58	AG4	K	19	24	Right-handed 310
Helix 59	AG5	K	85	89	Right-handed 310
Helix 60	AG6	K	90	98	Right-handed alpha
Helix 61	AG7	K	247	283	Right-handed alpha
Helix 62	AG8	L	11	40	Right-handed alpha
Helix 63	AG9	L	64	72	Right-handed alpha
Helix 64	AH1	L	83	85	Right-handed 310
Helix 65	AH2	M	2	28	Right-handed alpha
Helix 66	AH3	N	2	37	Right-handed alpha
Helix 67	AH4	O	3	33	Right-handed alpha
Helix 68	AH5	P	2	27	Right-handed alpha
Helix 69	AH6	Q	33	43	Right-handed alpha
Helix 70	AH7	Q	52	57	Right-handed alpha
Helix 71	AH8	R	33	43	Right-handed alpha
Helix 72	AH9	R	52	57	Right-handed alpha

There are 14 sheets in PDB entry 9ES7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	26	first strand
Strand 2	B	29	30	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	34	first strand
Strand 2	C	44	50	anti-parallel
Strand 3	C	125	131	anti-parallel
Strand 4	C	82	83	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	39	first strand
Strand 2	C	235	245	parallel
Strand 3	C	145	154	anti-parallel
Strand 4	C	70	76	anti-parallel
Strand 5	C	112	119	anti-parallel
Strand 6	C	103	104	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	66	67	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	184	first strand
Strand 2	C	190	195	anti-parallel
Strand 3	C	203	207	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	54	first strand
Strand 2	D	158	162	anti-parallel
Strand 3	D	149	155	anti-parallel
Strand 4	D	101	104	anti-parallel
Strand 5	D	87	91	anti-parallel
Strand 6	D	77	81	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	116	117	first strand
Strand 2	D	122	124	anti-parallel
Strand 3	D	131	132	anti-parallel
Strand 4	D	138	140	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	25	26	first strand
Strand 2	J	29	30	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	32	34	first strand
Strand 2	K	44	50	anti-parallel
Strand 3	K	125	131	anti-parallel
Strand 4	K	82	83	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	38	39	first strand
Strand 2	K	235	245	parallel
Strand 3	K	145	154	anti-parallel
Strand 4	K	70	76	anti-parallel
Strand 5	K	112	119	anti-parallel
Strand 6	K	103	104	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	59	60	first strand
Strand 2	K	66	67	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	178	184	first strand
Strand 2	K	190	195	anti-parallel
Strand 3	K	203	207	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	54	first strand
Strand 2	L	158	162	anti-parallel
Strand 3	L	149	155	anti-parallel
Strand 4	L	101	104	anti-parallel
Strand 5	L	87	91	anti-parallel
Strand 6	L	77	81	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	116	117	first strand
Strand 2	L	122	124	anti-parallel
Strand 3	L	131	132	anti-parallel
Strand 4	L	138	140	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ES7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ES7